RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NUPR1O60356 82 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 PPP1R17O96001 155 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 LINC00614P0C842 121 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 RBMY1A1P0DJD3 496 aaKnown RBP5.16□□□□□ -1.58
SF3A3-206ENST00000487062 RBMY1CP0DJD4 496 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 HTN1P15515 57 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 AMTP48728 403 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 LINC00310P59036 64 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 RBMY1FQ15415 496 aaKnown RBP5.16□□□□□ -1.58
SF3A3-206ENST00000487062 FA2HQ7L5A8 372 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 WFDC9Q8NEX5 89 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 RCHY1Q96PM5 261 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 SPXQ9BT56 116 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 MAP1LC3AQ9H492 121 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 C19orf73Q9NVV2 129 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 MDFICQ9P1T7 246 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 XCL2Q9UBD3 114 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 GOLT1BQ9Y3E0 138 aa5.16□□□□□ -1.58
SF3A3-206ENST00000487062 CUBNO60494 3623 aa5.15□□□□□ -1.58
SF3A3-206ENST00000487062 MUC4Q99102 2169 aa5.15□□□□□ -1.58
SF3A3-206ENST00000487062 SMKR1H3BMG3 65 aa5.15□□□□□ -1.59
SF3A3-206ENST00000487062 NPYP01303 97 aa5.15□□□□□ -1.59
SF3A3-206ENST00000487062 MGPP08493 103 aa5.15□□□□□ -1.59
SF3A3-206ENST00000487062 RPL35AP18077 110 aaKnown RBP5.15□□□□□ -1.59
SF3A3-206ENST00000487062 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.59
SF3A3-206ENST00000487062 PIK3CD-AS1Q5SR53 167 aa5.15□□□□□ -1.59
SF3A3-206ENST00000487062 C14orf178Q8N769 122 aaPredicted RBP5.15□□□□□ -1.59
SF3A3-206ENST00000487062 PTH2Q96A98 100 aa5.15□□□□□ -1.59
SF3A3-206ENST00000487062 SETD2Q9BYW2 2564 aaPredicted RBP5.15□□□□□ -1.59
SF3A3-206ENST00000487062 IGHV3OR16-12A0A075B7B8 117 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 LOC389332A0A1B0GUA5 103 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 M0R2P5 195 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 SPRY2O43597 315 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 NCR2O95944 276 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 IGLL1P15814 213 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 ZNF876PQ49A33 203 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 PYY3Q5JQD4 70 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 PRIMA1Q86XR5 153 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 C1orf158Q8N1D5 194 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 DEFB125Q8N687 156 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 NDUFAF3Q9BU61 184 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 WFDC10AQ9H1F0 79 aa5.14□□□□□ -1.59
SF3A3-206ENST00000487062 NXT2Q9NPJ8 142 aaKnown RBP5.14□□□□□ -1.59
SF3A3-206ENST00000487062 TEP1Q99973 2627 aaKnown RBP5.13□□□□□ -1.59
SF3A3-206ENST00000487062 A8MWV9 139 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 F5H697 171 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 BTF3P20290 206 aaKnown RBP5.13□□□□□ -1.59
SF3A3-206ENST00000487062 IFI27P40305 119 aaPredicted RBP5.13□□□□□ -1.59
SF3A3-206ENST00000487062 JOSD1Q15040 202 aaPredicted RBP5.13□□□□□ -1.59
SF3A3-206ENST00000487062 FAM19A2Q8N3H0 131 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 POM121L12Q8N7R1 296 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 TMEM263Q8WUH6 116 aaKnown RBP5.13□□□□□ -1.59
SF3A3-206ENST00000487062 URB1-AS1Q96HZ7 61 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 CSTL1Q9H114 145 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 KIF25-AS1Q9Y6Z4 181 aa5.13□□□□□ -1.59
SF3A3-206ENST00000487062 NIPBLQ6KC79 2804 aaeCLIP5.12□□□□□ -1.59
SF3A3-206ENST00000487062 TRAV26-2A0A0B4J265 109 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 IGHV1-24A0A0C4DH33 117 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 H7C1H1 209 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 RHODO00212 210 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 LEPROTL1O95214 131 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 GATA1P15976 413 aaPredicted RBP5.12□□□□□ -1.59
SF3A3-206ENST00000487062 DDTP30046 118 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 APOC4P55056 127 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 ZNF56Q15929 161 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 FAM74A4Q5TZK3 123 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 Q8N8P6 123 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 NRACQ8N912 160 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 C11orf72Q8NBR9 251 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 SPATA3Q8NHX4 192 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 C16orf74Q96GX8 76 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 C20orf78Q9BR46 151 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 HSPB8Q9UJY1 196 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 PLA2G2DQ9UNK4 145 aa5.12□□□□□ -1.59
SF3A3-206ENST00000487062 KIR2DL5BA0A0G2JN68 375 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 KIR2DL5BA0A0G2JPC4 375 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 LINC01546A6NGU7 62 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 K7EMI3 77 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 SCGB1D1O95968 90 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 CRYGDP07320 174 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 GIG44P09565 113 aaPredicted RBP5.11□□□□□ -1.59
SF3A3-206ENST00000487062 LINC00315P59091 139 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 KRTDAPP60985 99 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 SUMO2P61956 95 aaKnown RBP5.11□□□□□ -1.59
SF3A3-206ENST00000487062 RRN3P1Q2M238 152 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 Q6ZWC4 215 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 MRPL52Q86TS9 123 aaKnown RBP5.11□□□□□ -1.59
SF3A3-206ENST00000487062 KIR2DL5AQ8N109 375 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 KIR2DL5BQ8NHK3 375 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 RASL10AQ92737 203 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 SMIM2Q9BVW6 85 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 JPT2Q9H910 190 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 ST20Q9HBF5 79 aa5.11□□□□□ -1.59
SF3A3-206ENST00000487062 SMIM9A6NGZ8 99 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 GAS8-AS1O95177 125 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 HBDP02042 147 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 PRM2P04554 102 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 GYPEP15421 78 aa5.1□□□□□ -1.59
SF3A3-206ENST00000487062 AZU1P20160 251 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms