RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 DYNAPQ8N1N2 210 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 C18orf15Q96N68 181 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 KIR2DL4Q99706 377 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 AGPAT4-IT1Q9H0P7 198 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 SPANXCQ9NY87 97 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 SMAD5-AS1Q9Y6J3 95 aa3.56□□□□□ -1.84
SSBP1-211ENST00000484178 DSCAMO60469 2012 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 IGKV3D-20A0A0C4DH25 116 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 A8MWV9 139 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 K7EMT4 169 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 P0DMU3 169 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 FAM231AP0DMU4 169 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 FAM231CP0DMU5 169 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 UBE2D3P61077 147 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 UBE2D2P62837 147 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 CFAP126Q5VTH2 177 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 SCGB1D4Q6XE38 83 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 TEN1Q86WV5 123 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 SBSPONQ8IVN8 264 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 Q8N9W7 124 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 ZNF418Q8TF45 676 aaPredicted RBP3.55□□□□□ -1.84
SSBP1-211ENST00000484178 ITLN2Q8WWU7 325 aaPredicted RBP3.55□□□□□ -1.84
SSBP1-211ENST00000484178 PLEKHB2Q96CS7 222 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 OVOL2Q9BRP0 275 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 MCRIP2Q9BUT9 160 aaKnown RBP3.55□□□□□ -1.84
SSBP1-211ENST00000484178 PRO0461Q9UI25 63 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 MOB4Q9Y3A3 225 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 UFC1Q9Y3C8 167 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 PHLDA3Q9Y5J5 127 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 TSSC4Q9Y5U2 329 aaPredicted RBP3.55□□□□□ -1.84
SSBP1-211ENST00000484178 SDK1Q7Z5N4 2213 aa3.55□□□□□ -1.84
SSBP1-211ENST00000484178 FAM186AA6NE01 2351 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 TNCP24821 2201 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 SDHAF1A6NFY7 115 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 ZNF815PA8K554 130 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 SMKR1H3BMG3 65 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 LGALS1P09382 135 aaKnown RBP3.54□□□□□ -1.84
SSBP1-211ENST00000484178 APELAP0DMC3 54 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 Q6Q795 121 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 C2orf66Q6UXQ4 117 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 NFE4Q86UQ8 179 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 C10orf126Q8N4M7 172 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 SLC25A29Q8N8R3 303 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 Q8TAT8 98 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 FAM19A4Q96LR4 140 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 PRADC1Q9BSG0 188 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 PPDPFQ9H3Y8 114 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 Q9HAA7 133 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 EDA2RQ9HAV5 297 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 XIRP2A4UGR9 3374 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 UNC80Q8N2C7 3258 aa3.54□□□□□ -1.84
SSBP1-211ENST00000484178 MED13Q9UHV7 2174 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 PCNX2A6NKB5 2137 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 TRAV8-2A0A0B4J237 113 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 TRAV41A0A0B4J266 112 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 CLPSL1A2RUU4 121 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 LGALS9O00182 355 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 LEPROTO15243 131 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 COX6CP09669 75 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 COX6B1P14854 86 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 LGALS3P17931 250 aaKnown RBP3.53□□□□□ -1.84
SSBP1-211ENST00000484178 XGP55808 180 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 CKS1BP61024 79 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 WFDC2Q14508 124 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 NSUN5P1Q3KNT7 163 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 ETDBQ3ZM63 59 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 C11orf71Q6IPW1 123 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 BAALCQ8WXS3 180 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 PTH2Q96A98 100 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 GEMIN7Q9H840 131 aaKnown RBP3.53□□□□□ -1.84
SSBP1-211ENST00000484178 PRO1854Q9UHT4 67 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 PRR14LQ5THK1 2151 aa3.53□□□□□ -1.84
SSBP1-211ENST00000484178 RANBP2P49792 3224 aaKnown RBP3.53□□□□□ -1.84
SSBP1-211ENST00000484178 LAMA1P25391 3075 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 DIDO1Q9BTC0 2240 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 LAMA3Q16787 3333 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 INTS1Q8N201 2190 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 HEATR1Q9H583 2144 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 WDR87Q6ZQQ6 2873 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 CDH23Q9H251 3354 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 A0A0J9YXY3 114 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 A0A0J9YY99 117 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 FAM240AA0A1B0GVK7 77 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 IGIPA6NJ69 53 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 PRAC2D3DTV9 90 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 H3BVH4 76 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 K7ENP7 123 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 SOCS3O14543 225 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 NPFFO15130 113 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 TIMM17BO60830 172 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 DUSP14O95147 198 aaKnown RBP3.52□□□□□ -1.85
SSBP1-211ENST00000484178 ACYP1P07311 99 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 CD7P09564 240 aa3.52□□□□□ -1.85
SSBP1-211ENST00000484178 ZNF688P0C7X2 276 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms