RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 LCE1AQ5T7P2 110 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 Q8N9P0 234 aaPredicted RBP6.2□□□□□ -1.42
COL8A1-207ENST00000483969 VSIG2Q96IQ7 327 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 FAM210AQ96ND0 272 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 PHLDA3Q9Y5J5 127 aa6.2□□□□□ -1.42
COL8A1-207ENST00000483969 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
COL8A1-207ENST00000483969 H3BVH4 76 aa6.19□□□□□ -1.42
COL8A1-207ENST00000483969 SFTA3P0C7M3 94 aa6.19□□□□□ -1.42
COL8A1-207ENST00000483969 TOR2AQ5JU69 321 aa6.19□□□□□ -1.42
COL8A1-207ENST00000483969 CFAP126Q5VTH2 177 aa6.19□□□□□ -1.42
COL8A1-207ENST00000483969 PCNPQ8WW12 178 aaKnown RBP6.19□□□□□ -1.42
COL8A1-207ENST00000483969 ICOSQ9Y6W8 199 aa6.19□□□□□ -1.42
COL8A1-207ENST00000483969 A0A096LPF7 62 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 IGLV2-8P01709 118 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 P01737 135 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 CEBPGP53567 150 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 RAB14P61106 215 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 PEA15Q15121 130 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 ZFP2Q6ZN57 461 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 OR2D3Q8NGH3 330 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 PRADC1Q9BSG0 188 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 PARLQ9H300 379 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 SCRT2Q9NQ03 307 aa6.18□□□□□ -1.42
COL8A1-207ENST00000483969 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
COL8A1-207ENST00000483969 TRBV6-4A0A1B0GX49 114 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 C19orf71A6NCJ1 209 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 GATA1P15976 413 aaPredicted RBP6.17□□□□□ -1.42
COL8A1-207ENST00000483969 RPL19P84098 196 aaKnown RBP6.17□□□□□ -1.42
COL8A1-207ENST00000483969 ESRGQ1W209 222 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 NEGR1Q7Z3B1 354 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 SH2D6Q7Z4S9 175 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 OCC1Q8TAD7 63 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 SFRP2Q96HF1 295 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 SMDT1Q9H4I9 107 aa6.17□□□□□ -1.42
COL8A1-207ENST00000483969 STARD9Q9P2P6 4700 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 TRBV20OR9-2A0A075B6H5 130 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 IGHV3-73A0A0B4J1V6 119 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 ZNF727A8MUV8 499 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 F2Z2F3 143 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 M0R381 172 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 RHODO00212 210 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
COL8A1-207ENST00000483969 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 SRIP30626 198 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 RHOHQ15669 191 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 FAM74A3Q4VXF1 159 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 SPANXN1Q5VSR9 72 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 SMIM7Q9BQ49 75 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 LINC00588Q9Y4M8 146 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 LY96Q9Y6Y9 160 aa6.16□□□□□ -1.42
COL8A1-207ENST00000483969 CSMD3Q7Z407 3707 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 TENM2Q9NT68 2774 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 A0A1W2PPQ1 181 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 K7EQD1 137 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 SNAI2O43623 268 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 Q9H8V8 135 aa6.15□□□□□ -1.42
COL8A1-207ENST00000483969 MRPS16Q9Y3D3 137 aaKnown RBP6.15□□□□□ -1.42
COL8A1-207ENST00000483969 KMT2CQ8NEZ4 4911 aaKnown RBP6.14□□□□□ -1.43
COL8A1-207ENST00000483969 IGLV2-18A0A075B6J9 118 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 GATCO43716 136 aaKnown RBP6.14□□□□□ -1.43
COL8A1-207ENST00000483969 CRYGDP07320 174 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 SMIM17P0DL12 118 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 CACNG7P62955 275 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 TMEM241Q24JQ0 296 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 WDR73Q6P4I2 378 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 FER1L6-AS1Q8NA97 138 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 ZNRF2Q8NHG8 242 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 UPK3BQ9BT76 320 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 TPPP3Q9BW30 176 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 SAMD10Q9BYL1 202 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 RPP21Q9H633 154 aaKnown RBP6.14□□□□□ -1.43
COL8A1-207ENST00000483969 JPT2Q9H910 190 aa6.14□□□□□ -1.43
COL8A1-207ENST00000483969 PLECQ15149 4684 aaKnown RBP6.14□□□□□ -1.43
COL8A1-207ENST00000483969 A0A087WWL8 130 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 A8MWL6 223 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 K7EN84 100 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 M0R2N4 97 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 NXPH4O95158 308 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 IGLC6P0CF74 106 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 GZMBP10144 247 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 ERVFC1-1P60608 527 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 SSTP61278 116 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 SOHLH1Q5JUK2 328 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 FAM74A4Q5TZK3 123 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 UFSP1Q6NVU6 142 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 FAM231DQ6ZW35 169 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 OR10AG1Q8NH19 301 aa6.13□□□□□ -1.43
COL8A1-207ENST00000483969 RNASE7Q9H1E1 156 aaKnown RBP6.13□□□□□ -1.43
COL8A1-207ENST00000483969 TRAV9-2A0A087WT02 112 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 MUC21A0A0G2JKD1 596 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 NBDYA0A0U1RRE5 68 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 MUC21A0A140T8X8 626 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 TIRAPP58753 221 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 RAB4BP61018 213 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 TTC32Q5I0X7 151 aa6.12□□□□□ -1.43
COL8A1-207ENST00000483969 LYZL1Q6UWQ5 148 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms