RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 TRAV12-2A0A075B6T6 113 aa11.64□□□□□ -0.55
RXRA-202ENST00000481739 PF4P02776 101 aa11.64□□□□□ -0.55
RXRA-202ENST00000481739 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
RXRA-202ENST00000481739 LAGE3Q14657 143 aa11.64□□□□□ -0.55
RXRA-202ENST00000481739 TRAV26-2A0A0B4J265 109 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 CMC4P56277 68 aaPredicted RBP11.63□□□□□ -0.55
RXRA-202ENST00000481739 RPL32P62910 135 aaKnown RBP11.63□□□□□ -0.55
RXRA-202ENST00000481739 KRTAP24-1Q3LI83 254 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 Q8N1Y9 231 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 ZNF256Q9Y2P7 627 aaPredicted RBP11.63□□□□□ -0.55
RXRA-202ENST00000481739 KIF25-AS1Q9Y6Z4 181 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 KNCNA6PVL3 124 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 M0R143 59 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
RXRA-202ENST00000481739 ATP5LO75964 103 aa11.62□□□□□ -0.55
RXRA-202ENST00000481739 MGPP08493 103 aa11.62□□□□□ -0.55
RXRA-202ENST00000481739 IGLL1P15814 213 aa11.62□□□□□ -0.55
RXRA-202ENST00000481739 RASL10AQ92737 203 aa11.62□□□□□ -0.55
RXRA-202ENST00000481739 LINC00467Q9BRT7 94 aa11.62□□□□□ -0.55
RXRA-202ENST00000481739 C2orf88Q9BSF0 95 aa11.62□□□□□ -0.55
RXRA-202ENST00000481739 LINC01549A6NIU2 74 aa11.61□□□□□ -0.55
RXRA-202ENST00000481739 PIK3CD-AS1Q5SR53 167 aa11.61□□□□□ -0.55
RXRA-202ENST00000481739 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
RXRA-202ENST00000481739 CITED1Q99966 193 aa11.61□□□□□ -0.55
RXRA-202ENST00000481739 G0S2P27469 103 aa11.6□□□□□ -0.55
RXRA-202ENST00000481739 LINC00315P59091 139 aa11.6□□□□□ -0.55
RXRA-202ENST00000481739 GOLT1BQ9Y3E0 138 aa11.6□□□□□ -0.55
RXRA-202ENST00000481739 H0Y8G0 127 aa11.6□□□□□ -0.55
RXRA-202ENST00000481739 SAP30O75446 220 aa11.6□□□□□ -0.55
RXRA-202ENST00000481739 TMEM158Q8WZ71 300 aa11.6□□□□□ -0.55
RXRA-202ENST00000481739 CBY3A6NI87 242 aa11.59□□□□□ -0.55
RXRA-202ENST00000481739 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
RXRA-202ENST00000481739 Q6ZN92 141 aa11.59□□□□□ -0.55
RXRA-202ENST00000481739 PTH2Q96A98 100 aa11.59□□□□□ -0.55
RXRA-202ENST00000481739 FAM110AQ9BQ89 295 aa11.59□□□□□ -0.55
RXRA-202ENST00000481739 MDFICQ9P1T7 246 aa11.59□□□□□ -0.55
RXRA-202ENST00000481739 MAJINQ3KP22 176 aa11.58□□□□□ -0.56
RXRA-202ENST00000481739 MRPS16Q9Y3D3 137 aaKnown RBP11.58□□□□□ -0.56
RXRA-202ENST00000481739 OR11H12B2RN74 326 aa11.58□□□□□ -0.56
RXRA-202ENST00000481739 INSP01308 110 aa11.58□□□□□ -0.56
RXRA-202ENST00000481739 SNHG12Q9BXW3 62 aa11.58□□□□□ -0.56
RXRA-202ENST00000481739 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
RXRA-202ENST00000481739 RBMY1BA6NDE4 496 aaKnown RBP11.57□□□□□ -0.56
RXRA-202ENST00000481739 RBMY1EA6NEQ0 496 aaKnown RBP11.57□□□□□ -0.56
RXRA-202ENST00000481739 SPRY2O43597 315 aa11.57□□□□□ -0.56
RXRA-202ENST00000481739 RBMY1DP0C7P1 496 aaKnown RBP11.57□□□□□ -0.56
RXRA-202ENST00000481739 FXYD7P58549 80 aa11.57□□□□□ -0.56
RXRA-202ENST00000481739 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
RXRA-202ENST00000481739 NUDT3O95989 172 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 ZNF415Q09FC8 603 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 LINC00482Q8N8I6 264 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 RPL39LQ96EH5 51 aaKnown RBP11.56□□□□□ -0.56
RXRA-202ENST00000481739 MUC4Q99102 2169 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
RXRA-202ENST00000481739 ZNF876PQ49A33 203 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 SUMO4Q6EEV6 95 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 STHQ8IWL8 128 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 PMCHL2Q9BQD1 86 aa11.56□□□□□ -0.56
RXRA-202ENST00000481739 FBN1P35555 2871 aaKnown RBP11.55□□□□□ -0.56
RXRA-202ENST00000481739 hDV102S1A0JD36 115 aa11.55□□□□□ -0.56
RXRA-202ENST00000481739 TCAPO15273 167 aa11.55□□□□□ -0.56
RXRA-202ENST00000481739 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
RXRA-202ENST00000481739 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
RXRA-202ENST00000481739 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
RXRA-202ENST00000481739 SLC25A34Q6PIV7 304 aa11.55□□□□□ -0.56
RXRA-202ENST00000481739 C3orf56Q8N813 242 aa11.55□□□□□ -0.56
RXRA-202ENST00000481739 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
RXRA-202ENST00000481739 F5H697 171 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 VCYO14598 125 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 EREGO14944 169 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 CRYGDP07320 174 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 C18orf15Q96N68 181 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 SPXQ9BT56 116 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 AGRNO00468 2067 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 SORL1Q92673 2214 aa11.54□□□□□ -0.56
RXRA-202ENST00000481739 A0A087WWL8 130 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.53□□□□□ -0.56
RXRA-202ENST00000481739 H7C1H1 209 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 M0R2P5 195 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 IGLV1-51P01701 117 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 PRSS1P07477 247 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 POLR2KP53803 58 aaKnown RBP11.53□□□□□ -0.56
RXRA-202ENST00000481739 ZNF124Q15973 351 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 C12orf54Q6X4T0 127 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 MCRIP2Q9BUT9 160 aaKnown RBP11.53□□□□□ -0.56
RXRA-202ENST00000481739 CSTL1Q9H114 145 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 A8MWV9 139 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 ODF1Q14990 250 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 ZNF56Q15929 161 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 TRPT1Q86TN4 253 aaKnown RBP11.53□□□□□ -0.56
RXRA-202ENST00000481739 LURAP1LQ8IV03 231 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 ZMAT4Q9H898 229 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 JPT2Q9H910 190 aa11.53□□□□□ -0.56
RXRA-202ENST00000481739 VWFP04275 2813 aa11.52□□□□□ -0.56
RXRA-202ENST00000481739 TRAV12-1A0A0B4J245 112 aa11.52□□□□□ -0.57
RXRA-202ENST00000481739 TRBV27A0A0K0K1C4 114 aa11.52□□□□□ -0.57
RXRA-202ENST00000481739 FAM74A4Q5TZK3 123 aa11.52□□□□□ -0.57
RXRA-202ENST00000481739 M0QY20 66 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms