RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 MRPL30Q8TCC3 161 aaKnown RBP2.73□□□□□ -1.97
CCDC171-207ENST00000478913 LSM10Q969L4 123 aaKnown RBP2.73□□□□□ -1.97
CCDC171-207ENST00000478913 SMIM12Q96EX1 92 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 ZNF488Q96MN9 340 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 TMEM56Q96MV1 263 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 FAAP24Q9BTP7 215 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 TMEM147Q9BVK8 224 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 SNHG12Q9BXW3 62 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 DPH3P1Q9H4G8 78 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 WFDC1Q9HC57 220 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 TMEM56-RWDD3S4R434 201 aa2.73□□□□□ -1.97
CCDC171-207ENST00000478913 TRAV10A0A0B4J240 114 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 OR11H12B2RN74 326 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 M0R135 149 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 SIRPB1O00241 398 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 SYNGR2O43760 224 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 MPDU1O75352 247 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 OR7C1O76099 320 aaPredicted RBP2.72□□□□□ -1.97
CCDC171-207ENST00000478913 OR5G3P0C626 314 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 LINC00869P0C866 280 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 APLNRP35414 380 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 CEACAM3P40198 252 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 KRTAP10-10P60014 251 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 KRTDAPP60985 99 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 RPL23P62829 140 aaKnown RBP2.72□□□□□ -1.97
CCDC171-207ENST00000478913 CCL20P78556 96 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 FMODQ06828 376 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 SLC38A11Q08AI6 406 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 CATR1Q13166 79 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 RTL8BQ17RB0 113 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 RPEL1Q2QD12 228 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 HLA-DRB5Q30154 266 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 ORMDL2Q53FV1 153 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 FAM78BQ5VT40 261 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 SLC25A34Q6PIV7 304 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 Q6ZS49 121 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 REEP6Q96HR9 211 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 SPACA5Q96QH8 159 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 CAMK2N2Q96S95 79 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 HSPB9Q9BQS6 159 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 GGTLC1Q9BX51 225 aa2.72□□□□□ -1.97
CCDC171-207ENST00000478913 MRPS16Q9Y3D3 137 aaKnown RBP2.72□□□□□ -1.97
CCDC171-207ENST00000478913 UBE2L5PA0A1B0GUS4 154 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 J3QR89 54 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 K7EP13 123 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 CXorf1O96002 111 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 REG1AP05451 166 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 PFN1P07737 140 aaKnown RBP2.71□□□□□ -1.98
CCDC171-207ENST00000478913 CD7P09564 240 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 RBM11P57052 281 aaKnown RBP2.71□□□□□ -1.98
CCDC171-207ENST00000478913 SLC35B1P78383 322 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 RUNX1Q01196 453 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 TMEM267Q0VDI3 215 aaPredicted RBP2.71□□□□□ -1.98
CCDC171-207ENST00000478913 FOXF1Q12946 379 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 HIST3H3Q16695 136 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 SPATA45Q537H7 98 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 OR10J3Q5JRS4 329 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 SPANXN5Q5MJ07 72 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 GTF2H5Q6ZYL4 71 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 NEGR1Q7Z3B1 354 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 GAPTQ8N292 157 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 OR51H1Q8NH63 302 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 OR2AE1Q8NHA4 323 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 C4orf3Q8WVX3 66 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 SFRP2Q96HF1 295 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 PMCHL2Q9BQD1 86 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 ULBP2Q9BZM5 246 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 WDR61Q9GZS3 305 aaKnown RBP2.71□□□□□ -1.98
CCDC171-207ENST00000478913 ENY2Q9NPA8 101 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 RPRMQ9NS64 109 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.71□□□□□ -1.98
CCDC171-207ENST00000478913 TP53TG1Q9Y2A0 90 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 LAMTOR2Q9Y2Q5 125 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 TBL2Q9Y4P3 447 aaKnown RBP2.71□□□□□ -1.98
CCDC171-207ENST00000478913 LHFPL6Q9Y693 200 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 PXMP4Q9Y6I8 212 aa2.71□□□□□ -1.98
CCDC171-207ENST00000478913 TRAV30A0A087WSZ9 112 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 LOC102724200A0A096LPH7 203 aaPredicted RBP2.7□□□□□ -1.98
CCDC171-207ENST00000478913 IZUMO1RA6ND01 250 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 LY6LH3BQJ8 138 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 M0R1X1 148 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 RER1O15258 196 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 HSBP1O75506 76 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 PGLYRP1O75594 196 aaPredicted RBP2.7□□□□□ -1.98
CCDC171-207ENST00000478913 S1PR2O95136 353 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 HLA-DQA1P01909 254 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 ESDP10768 282 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 IL3RAP26951 378 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 HLA-DMBP28068 263 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 SSTR5P35346 364 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 TAS2R45P59539 299 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 YPEL3P61236 119 aaPredicted RBP2.7□□□□□ -1.98
CCDC171-207ENST00000478913 Q0VG73 95 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 PRSS8Q16651 343 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 NMSQ5H8A3 153 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 C10orf128Q5T292 105 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 RASL11AQ6T310 242 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 ASCL4Q6XD76 172 aa2.7□□□□□ -1.98
CCDC171-207ENST00000478913 MRPL21Q7Z2W9 205 aaKnown RBP2.7□□□□□ -1.98
CCDC171-207ENST00000478913 Q8IYB0 196 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms