RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 GYPEP15421 78 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 CCL18P55774 89 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 SLAQ13239 276 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 DNLZQ5SXM8 178 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-215ENST00000478531 ZNF575Q86XF7 245 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 OR10AG1Q8NH19 301 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 RNASE7Q9H1E1 156 aaKnown RBP4.8□□□□□ -1.64
BRCA1-215ENST00000478531 BIN3Q9NQY0 253 aa4.8□□□□□ -1.64
BRCA1-215ENST00000478531 A0A087WWL8 130 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 LOC100131303A0A0U1RQF7 123 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 C19orf71A6NCJ1 209 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 A8MWV9 139 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 H3BNG1 76 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 SRP19P09132 144 aaKnown RBP4.79□□□□□ -1.64
BRCA1-215ENST00000478531 ZFP82Q8N141 532 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 OCC1Q8TAD7 63 aa4.79□□□□□ -1.64
BRCA1-215ENST00000478531 ZNF727A8MUV8 499 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 K7EQD1 137 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 M0R2N4 97 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 CXCL1P09341 107 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 GATA1P15976 413 aaPredicted RBP4.78□□□□□ -1.64
BRCA1-215ENST00000478531 SRIP30626 198 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 SRSF3P84103 164 aaKnown RBP4.78□□□□□ -1.64
BRCA1-215ENST00000478531 RNF212Q495C1 297 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 SPANXN1Q5VSR9 72 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 PTH2Q96A98 100 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 SAMD10Q9BYL1 202 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 SCRT2Q9NQ03 307 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 LINC00588Q9Y4M8 146 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 MED14OSP0DP75 135 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 RPS20P60866 119 aaKnown RBP4.78□□□□□ -1.64
BRCA1-215ENST00000478531 PEA15Q15121 130 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 MRPL23Q16540 153 aaKnown RBP4.78□□□□□ -1.64
BRCA1-215ENST00000478531 ESRGQ1W209 222 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 SLC25A29Q8N8R3 303 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 FER1L6-AS1Q8NA97 138 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 NUDT10Q8NFP7 164 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 NUDT11Q96G61 164 aa4.78□□□□□ -1.64
BRCA1-215ENST00000478531 RPP21Q9H633 154 aaKnown RBP4.78□□□□□ -1.64
BRCA1-215ENST00000478531 C9JQL5 133 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 SNAI2O43623 268 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 OR5AL1P0C617 328 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 RHOHQ15669 191 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 PIK3CD-AS1Q5SR53 167 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 Q6ZSN1 163 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 SFRP2Q96HF1 295 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 PRADC1Q9BSG0 188 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 FAT2Q9NYQ8 4349 aa4.77□□□□□ -1.65
BRCA1-215ENST00000478531 EPPK1P58107 5090 aaKnown RBP4.77□□□□□ -1.65
BRCA1-215ENST00000478531 RHODO00212 210 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 NXPH4O95158 308 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 IGLC6P0CF74 106 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 ZNF56Q15929 161 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 ZFP2Q6ZN57 461 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 NEGR1Q7Z3B1 354 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 LINC01551Q86U37 167 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 C14orf178Q8N769 122 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-215ENST00000478531 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 TRBV6-4A0A1B0GX49 114 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 SMIM17P0DL12 118 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-215ENST00000478531 IFITM2Q01629 132 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 ADIRFQ15847 76 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 UFSP1Q6NVU6 142 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 LYZL1Q6UWQ5 148 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 ZNRF2Q8NHG8 242 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 AP1S3Q96PC3 154 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 SSBP4Q9BWG4 385 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-215ENST00000478531 C1orf43Q9BWL3 253 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
BRCA1-215ENST00000478531 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 GAGE12JA6NER3 117 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 F5H697 171 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 CRYGDP07320 174 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 MGPP08493 103 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 RAB4AP20338 218 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 GAGE1Q13065 139 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 GAGE4Q13068 117 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 GAGE5Q13069 117 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 TMEM241Q24JQ0 296 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 GAGE13Q4V321 117 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 FAM74A3Q4VXF1 159 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 CT83Q5H943 113 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 SOHLH1Q5JUK2 328 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 LYPD5Q6UWN5 251 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 MSRB1Q9NZV6 116 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 NAT8Q9UHE5 227 aa4.75□□□□□ -1.65
BRCA1-215ENST00000478531 MRPS16Q9Y3D3 137 aaKnown RBP4.75□□□□□ -1.65
BRCA1-215ENST00000478531 A0A1W2PPQ1 181 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 F2Z2F3 143 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 CTRLP40313 264 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 RPL23P62829 140 aaKnown RBP4.74□□□□□ -1.65
BRCA1-215ENST00000478531 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 SMDT1Q9H4I9 107 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 Q9H8V8 135 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 Q9UF83 564 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 PKD1P98161 4303 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 A8MWL6 223 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms