RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ZNF56Q15929 161 aa5.94□□□□□ -1.46
CNN3-205ENST00000474409 LINC00612Q8N6U2 182 aa5.94□□□□□ -1.46
CNN3-205ENST00000474409 C14orf178Q8N769 122 aaPredicted RBP5.94□□□□□ -1.46
CNN3-205ENST00000474409 C11orf45Q8TAV5 145 aa5.94□□□□□ -1.46
CNN3-205ENST00000474409 DPH3P1Q9H4G8 78 aa5.94□□□□□ -1.46
CNN3-205ENST00000474409 JPT2Q9H910 190 aa5.94□□□□□ -1.46
CNN3-205ENST00000474409 TRBV24-1A0A075B6N3 115 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 IGHV3-73A0A0B4J1V6 119 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 A0A1B0GXF2 115 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 F5H697 171 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 RS1O15537 224 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 HTN3P15516 51 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 EVI2AP22794 236 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 COX19Q49B96 90 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 CFAP126Q5VTH2 177 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 RASL11AQ6T310 242 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 FAM210BQ96KR6 192 aa5.93□□□□□ -1.46
CNN3-205ENST00000474409 COL7A1Q02388 2944 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 TRGV4A0A0C4DH28 118 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 HLA-DQA1P01909 254 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 ATP5G1P05496 136 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
CNN3-205ENST00000474409 C12orf74Q32Q52 190 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 Q6ZTC4 211 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 AMN1Q8IY45 258 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.92□□□□□ -1.46
CNN3-205ENST00000474409 ZNF479Q96JC4 524 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 C18orf15Q96N68 181 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 SAMD10Q9BYL1 202 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 TMEM191AQ9H0A3 160 aa5.92□□□□□ -1.46
CNN3-205ENST00000474409 CIDEAO60543 219 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 MT-ND6P03923 174 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 ZFP2Q6ZN57 461 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 POM121L12Q8N7R1 296 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 GATD1Q8NB37 220 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 FRZBQ92765 325 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 YPEL4Q96NS1 127 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 MEGF8Q7Z7M0 2845 aa5.91□□□□□ -1.46
CNN3-205ENST00000474409 F5H768 121 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 H7C1H1 209 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 K7EQD1 137 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 CRYGDP07320 174 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 RPS10P46783 165 aaKnown RBP5.9□□□□□ -1.46
CNN3-205ENST00000474409 FAM104BQ5XKR9 115 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 SUMO4Q6EEV6 95 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 TMEM136Q6ZRR5 245 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
CNN3-205ENST00000474409 EDA2RQ9HAV5 297 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 TRAPPC1Q9Y5R8 145 aa5.9□□□□□ -1.46
CNN3-205ENST00000474409 DEFB131BA0A096LNP1 70 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 TRAV10A0A0B4J240 114 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 TRAV26-2A0A0B4J265 109 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 NCR2O95944 276 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 APCSP02743 223 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 GATA1P15976 413 aaPredicted RBP5.89□□□□□ -1.47
CNN3-205ENST00000474409 RAB5AP20339 215 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 HOXA5P20719 270 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 SLAQ13239 276 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 RHOHQ15669 191 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 MRPL51Q4U2R6 128 aaKnown RBP5.89□□□□□ -1.47
CNN3-205ENST00000474409 UFSP1Q6NVU6 142 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 MRAP2Q96G30 205 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 KIF25-AS1Q9Y6Z4 181 aa5.89□□□□□ -1.47
CNN3-205ENST00000474409 A0A0J9YY99 117 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 COLCA2A8K830 154 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 D6R8Y8 96 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 SMKR1H3BMG3 65 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 RAB4AP20338 218 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 CKS2P33552 79 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 FABP9Q0Z7S8 132 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 FHL2Q14192 279 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 OR10J3Q5JRS4 329 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 RNF185Q96GF1 192 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 PRADC1Q9BSG0 188 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 PRO0255Q9UI72 69 aa5.88□□□□□ -1.47
CNN3-205ENST00000474409 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 TRAV26-1A0A087WT03 109 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 TRBV6-4A0A1B0GX49 114 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 PAX4O43316 350 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 LINC00315P59091 139 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 KIAA1644Q3SXP7 199 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 ORMDL3Q8N138 153 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 SLC25A29Q8N8R3 303 aa5.87□□□□□ -1.47
CNN3-205ENST00000474409 PHLDA1Q8WV24 401 aaPredicted RBP5.87□□□□□ -1.47
CNN3-205ENST00000474409 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 NUPR2A6NF83 97 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 PPP1R17O96001 155 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 PPBPP02775 128 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 P0DMU3 169 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 FAM231AP0DMU4 169 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 FAM231CP0DMU5 169 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 SRIP30626 198 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 CRYBA4P53673 196 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 RPL36AP83881 106 aaKnown RBP5.86□□□□□ -1.47
CNN3-205ENST00000474409 Q6ZSN1 163 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 RPL36ALQ969Q0 106 aaKnown RBP5.86□□□□□ -1.47
CNN3-205ENST00000474409 RPL39LQ96EH5 51 aaKnown RBP5.86□□□□□ -1.47
CNN3-205ENST00000474409 PRELID3AQ96N28 172 aa5.86□□□□□ -1.47
CNN3-205ENST00000474409 HHLA3Q9XRX5 114 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms