RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 CRIP1P50238 77 aa8.93□□□□□ -0.98
CHD3-209ENST00000473376 Q0VG73 95 aa8.93□□□□□ -0.98
CHD3-209ENST00000473376 AKR1C8PQ5T2L2 129 aa8.93□□□□□ -0.98
CHD3-209ENST00000473376 DAZ4Q86SG3 579 aaKnown RBP8.93□□□□□ -0.98
CHD3-209ENST00000473376 DEFB104AQ8WTQ1 72 aa8.93□□□□□ -0.98
CHD3-209ENST00000473376 SAMD10Q9BYL1 202 aa8.93□□□□□ -0.98
CHD3-209ENST00000473376 DAZ3Q9NR90 486 aaKnown RBP8.93□□□□□ -0.98
CHD3-209ENST00000473376 PHLDA3Q9Y5J5 127 aa8.93□□□□□ -0.98
CHD3-209ENST00000473376 MYCBP2O75592 4640 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 KRTAP29-1A8MX34 341 aaPredicted RBP8.92□□□□□ -0.98
CHD3-209ENST00000473376 H3BVH4 76 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 LTAP01374 205 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 S100A9P06702 114 aaKnown RBP8.92□□□□□ -0.98
CHD3-209ENST00000473376 CXCL1P09341 107 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 TPT1P13693 172 aaKnown RBP8.92□□□□□ -0.98
CHD3-209ENST00000473376 Q5BKY6 102 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 ZFP82Q8N141 532 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 C14orf178Q8N769 122 aaPredicted RBP8.92□□□□□ -0.98
CHD3-209ENST00000473376 OR10G8Q8NGN5 311 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 ZC2HC1AQ96GY0 325 aa8.92□□□□□ -0.98
CHD3-209ENST00000473376 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 PKIAP61925 76 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 UBE2G1P62253 170 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
CHD3-209ENST00000473376 WFDC2Q14508 124 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 C14orf177Q52M58 125 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 KCNIP4Q6PIL6 250 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 STOML3Q8TAV4 291 aa8.91□□□□□ -0.98
CHD3-209ENST00000473376 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
CHD3-209ENST00000473376 A0A087WX48 190 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 SH2D1AO60880 128 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 UBE2D3P61077 147 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 UBE2D2P62837 147 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 Q8N3U1 123 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 JPT2Q9H910 190 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 Q9UF83 564 aa8.9□□□□□ -0.98
CHD3-209ENST00000473376 FXYD6-FXYD2A0A087WZ82 144 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 MAP1LC3B2A6NCE7 125 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 UBE2G2P60604 165 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 RAB4BP61018 213 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 LINC00528Q8N1L1 170 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 CHAC1Q9BUX1 264 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 MAP1LC3BQ9GZQ8 125 aa8.89□□□□□ -0.99
CHD3-209ENST00000473376 RBFOX3A6NFN3 312 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 J3QL48 77 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 M0R036 132 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 HAMPP81172 84 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 TMEM97Q5BJF2 176 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 FAM74A4Q5TZK3 123 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 PRR27Q6MZM9 219 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.88□□□□□ -0.99
CHD3-209ENST00000473376 BAALCQ8WXS3 180 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 KLK12Q9UKR0 248 aa8.88□□□□□ -0.99
CHD3-209ENST00000473376 IGKV2D-24A0A075B6R9 120 aa8.87□□□□□ -0.99
CHD3-209ENST00000473376 TRBV6-8A0A0A6YYG3 113 aa8.87□□□□□ -0.99
CHD3-209ENST00000473376 SSBP4Q9BWG4 385 aaPredicted RBP8.87□□□□□ -0.99
CHD3-209ENST00000473376 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
CHD3-209ENST00000473376 A0A087WWL8 130 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 GRIFINA4D1Z8 144 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 UMAD1C9J7I0 102 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 M0R381 172 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 OR5AL1P0C617 328 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 SCXQ7RTU7 201 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 MLST8Q9BVC4 326 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 CYTL1Q9NRR1 136 aa8.86□□□□□ -0.99
CHD3-209ENST00000473376 G3V3Q6 166 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 LECT2O14960 151 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 SNAI2O43623 268 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 IGLV2-8P01709 118 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 AKR1C3P42330 323 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 ZNF345Q14585 488 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 CST9LP1Q5W188 147 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 UBE2WQ96B02 151 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 C1orf43Q9BWL3 253 aa8.85□□□□□ -0.99
CHD3-209ENST00000473376 OXTP01178 125 aa8.84□□□□□ -0.99
CHD3-209ENST00000473376 MIAQ16674 131 aa8.84□□□□□ -0.99
CHD3-209ENST00000473376 DGAT2L7PQ6IED9 249 aa8.84□□□□□ -0.99
CHD3-209ENST00000473376 ZNF471Q9BX82 626 aaPredicted RBP8.84□□□□□ -0.99
CHD3-209ENST00000473376 VAX2Q9UIW0 290 aa8.84□□□□□ -0.99
CHD3-209ENST00000473376 ARPC5O15511 151 aa8.83□□□□□ -1
CHD3-209ENST00000473376 SERTAD4-AS1Q5TG53 156 aa8.83□□□□□ -1
CHD3-209ENST00000473376 ENHOQ6UWT2 76 aa8.83□□□□□ -1
CHD3-209ENST00000473376 TMEM262E9PQX1 116 aa8.82□□□□□ -1
CHD3-209ENST00000473376 PAGE4O60829 102 aa8.82□□□□□ -1
CHD3-209ENST00000473376 CRPP02741 224 aa8.82□□□□□ -1
CHD3-209ENST00000473376 KRTAP10-4P60372 401 aaPredicted RBP8.82□□□□□ -1
CHD3-209ENST00000473376 NEXN-AS1Q8NBZ9 246 aa8.82□□□□□ -1
CHD3-209ENST00000473376 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
CHD3-209ENST00000473376 PRR34Q9NV39 138 aa8.82□□□□□ -1
CHD3-209ENST00000473376 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
CHD3-209ENST00000473376 TMSB15BA0A087X1C1 80 aa8.81□□□□□ -1
CHD3-209ENST00000473376 HMSDA8MTL9 139 aa8.81□□□□□ -1
CHD3-209ENST00000473376 PFDN1O60925 122 aa8.81□□□□□ -1
CHD3-209ENST00000473376 BAGE2Q86Y30 109 aa8.81□□□□□ -1
CHD3-209ENST00000473376 KCNRGQ8N5I3 272 aa8.81□□□□□ -1
CHD3-209ENST00000473376 SFT2D1Q8WV19 159 aa8.81□□□□□ -1
CHD3-209ENST00000473376 EIF5AP63241 154 aaKnown RBP8.8□□□□□ -1
CHD3-209ENST00000473376 ZNF56Q15929 161 aa8.8□□□□□ -1
CHD3-209ENST00000473376 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms