RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 ZNF518AQ6AHZ1 1483 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 CBLN1P23435 193 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 ZNF56Q15929 161 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 C12orf73Q69YU5 71 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 IFI27L1Q96BM0 104 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 PDCD10Q9BUL8 212 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 SERP1Q9Y6X1 66 aa1.39□□□□□ -2.19
CCDC66-215ENST00000473322 SNRNP200O75643 2136 aaKnown RBP1.39□□□□□ -2.19
CCDC66-215ENST00000473322 KDM6BO15054 1643 aa1.38□□□□□ -2.19
CCDC66-215ENST00000473322 IFNA17P01571 189 aa1.38□□□□□ -2.19
CCDC66-215ENST00000473322 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
CCDC66-215ENST00000473322 Q6AWC8 147 aa1.38□□□□□ -2.19
CCDC66-215ENST00000473322 PP6455Q8WZ26 134 aa1.38□□□□□ -2.19
CCDC66-215ENST00000473322 BET1LQ9NYM9 111 aa1.38□□□□□ -2.19
CCDC66-215ENST00000473322 MED12Q93074 2177 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 IFNGP01579 166 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 C4orf33Q8N1A6 199 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 SPANXDQ9BXN6 97 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 SEC11CQ9BY50 192 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 RPRMQ9NS64 109 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 NALCNQ8IZF0 1738 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 IFT140Q96RY7 1462 aa1.37□□□□□ -2.19
CCDC66-215ENST00000473322 KMT2BQ9UMN6 2715 aaPredicted RBP1.36□□□□□ -2.19
CCDC66-215ENST00000473322 TRAV12-3A0A0B4J271 114 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 PIGBOS1A0A0B4J2F0 54 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 TCRBV3S1A0A5B6 114 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 A6NIN4 97 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 LINC00587B1AMM8 73 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 PHLPP1O60346 1717 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 Q56UQ5 140 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 CGREF1Q99674 301 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 COA4Q9NYJ1 87 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 ATG2AQ2TAZ0 1938 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 KIF13AQ9H1H9 1805 aa1.36□□□□□ -2.19
CCDC66-215ENST00000473322 ROS1P08922 2347 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 CITO14578 2027 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 SNCGO76070 127 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 TNFP01375 233 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 HIST1H1DP16402 221 aaKnown RBP1.35□□□□□ -2.19
CCDC66-215ENST00000473322 FXYD6P3P58550 94 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 SSBP1Q04837 148 aaKnown RBP1.35□□□□□ -2.19
CCDC66-215ENST00000473322 CYP2G1PQ6ZSU1 146 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 TMEM14BQ9NUH8 114 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 A2ML1A8K2U0 1454 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 FOCADQ5VW36 1801 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 TENM1Q9UKZ4 2725 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 FAM135AQ9P2D6 1515 aa1.35□□□□□ -2.19
CCDC66-215ENST00000473322 EIF4G3O43432 1585 aaKnown RBP1.34□□□□□ -2.19
CCDC66-215ENST00000473322 A0A096LNT2 108 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 LOC100130705A0A1B0GUX0 176 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 MCRIP1C9JLW8 97 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 AKAIN1P0CW23 69 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 CCL3L1P16619 93 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 WHAMMP3Q1A5X7 153 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 ZNF818PQ6ZRF7 136 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 PLAC4Q8WY50 150 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 SCN3BQ9NY72 215 aa1.34□□□□□ -2.19
CCDC66-215ENST00000473322 RBAKDNA6NC62 111 aa1.33□□□□□ -2.2
CCDC66-215ENST00000473322 NPC2P61916 151 aa1.33□□□□□ -2.2
CCDC66-215ENST00000473322 UBE2G1P62253 170 aa1.33□□□□□ -2.2
CCDC66-215ENST00000473322 CCL8P80075 99 aa1.33□□□□□ -2.2
CCDC66-215ENST00000473322 RPL7L1Q6DKI1 246 aaKnown RBP1.33□□□□□ -2.2
CCDC66-215ENST00000473322 Q86TA4 180 aa1.33□□□□□ -2.2
CCDC66-215ENST00000473322 RIMS1Q86UR5 1692 aaKnown RBP1.32□□□□□ -2.2
CCDC66-215ENST00000473322 RREB1Q92766 1687 aa1.32□□□□□ -2.2
CCDC66-215ENST00000473322 LAMA4Q16363 1823 aa1.32□□□□□ -2.2
CCDC66-215ENST00000473322 CORTO00230 105 aa1.32□□□□□ -2.2
CCDC66-215ENST00000473322 PRB4P10163 310 aaPredicted RBP1.32□□□□□ -2.2
CCDC66-215ENST00000473322 LSM10Q969L4 123 aaKnown RBP1.32□□□□□ -2.2
CCDC66-215ENST00000473322 IER3IP1Q9Y5U9 82 aa1.32□□□□□ -2.2
CCDC66-215ENST00000473322 TRBV10-3A0A0K0K1G6 114 aa1.31□□□□□ -2.2
CCDC66-215ENST00000473322 APOC4-APOC2K7ER74 178 aa1.31□□□□□ -2.2
CCDC66-215ENST00000473322 APOC2P02655 101 aa1.31□□□□□ -2.2
CCDC66-215ENST00000473322 UBE2D1P51668 147 aa1.31□□□□□ -2.2
CCDC66-215ENST00000473322 ELOF1P60002 83 aaKnown RBP1.31□□□□□ -2.2
CCDC66-215ENST00000473322 MRPS10P82664 201 aaKnown RBP1.31□□□□□ -2.2
CCDC66-215ENST00000473322 KIAA0100Q14667 2235 aaKnown RBP1.31□□□□□ -2.2
CCDC66-215ENST00000473322 FXYD1O00168 92 aa1.3□□□□□ -2.2
CCDC66-215ENST00000473322 TFF1P04155 84 aa1.3□□□□□ -2.2
CCDC66-215ENST00000473322 RPL37P61927 97 aaKnown RBP1.3□□□□□ -2.2
CCDC66-215ENST00000473322 Q8N8P6 123 aa1.3□□□□□ -2.2
CCDC66-215ENST00000473322 PPP3R2Q96LZ3 170 aa1.3□□□□□ -2.2
CCDC66-215ENST00000473322 TRBV7-1A0A0A6YYK4 115 aa1.29□□□□□ -2.2
CCDC66-215ENST00000473322 SPAARA0A1B0GVQ0 90 aa1.29□□□□□ -2.2
CCDC66-215ENST00000473322 MIF4GDA9UHW6 222 aaKnown RBP1.29□□□□□ -2.2
CCDC66-215ENST00000473322 SPINK9Q5DT21 86 aa1.29□□□□□ -2.2
CCDC66-215ENST00000473322 FAM74A4Q5TZK3 123 aa1.29□□□□□ -2.2
CCDC66-215ENST00000473322 COX7B2Q8TF08 81 aa1.29□□□□□ -2.2
CCDC66-215ENST00000473322 BCORL1Q5H9F3 1711 aa1.29□□□□□ -2.2
CCDC66-215ENST00000473322 AFDNP55196 1824 aaKnown RBP1.29□□□□□ -2.2
CCDC66-215ENST00000473322 F6UZH7 168 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 SIX6O95475 246 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 GNG4P50150 75 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 C8orf59Q8N0T1 100 aaPredicted RBP1.28□□□□□ -2.2
CCDC66-215ENST00000473322 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 C10orf82Q8WW14 230 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 PXDNQ92626 1479 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 ABCA4P78363 2273 aa1.28□□□□□ -2.2
CCDC66-215ENST00000473322 SPTBP11277 2137 aa1.27□□□□□ -2.21
CCDC66-215ENST00000473322 QRICH2Q9H0J4 1663 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms