RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-208	ENST00000473003	ID3	Q02535	119 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	C9orf116	Q5BN46	136 aa	Predicted RBP	4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	NTM-AS1	Q6ZSK4	140 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	FXYD5	Q96DB9	178 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	FAM167A-AS1	Q96KT0	104 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	CARD19	Q96LW7	228 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	PRRT1	Q99946	306 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	SLIRP	Q9GZT3	109 aa	Known RBP	4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	NAA50	Q9GZZ1	169 aa	Known RBP	4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003	PHLDA3	Q9Y5J5	127 aa		4.59	□□□□□ -1.67
RAPGEF4-208	ENST00000473003		A0A087WZ39	114 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TGFBR1	P36897	503 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	RPS19	P39019	145 aa	Known RBP	4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	RPL29	P47914	159 aa	Known RBP	4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	ZNF80	P51504	273 aa	Predicted RBP	4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	GAGE2B	Q13066	116 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TMEM97	Q5BJF2	176 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TYMSOS	Q8TAI1	123 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	MITD1	Q8WV92	249 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SCGB3A2	Q96PL1	93 aa		4.58	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TRBV25-1	A0A075B6N4	114 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003		A0A087X002	238 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	HPGDS	O60760	199 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	GABARAPL2	P60520	117 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	RAN	P62826	216 aa	Known RBP	4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	KRTAP11-1	Q8IUC1	163 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	NEXN-AS1	Q8NBZ9	246 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	BCL7B	Q9BQE9	202 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	WDR83OS	Q9Y284	106 aa		4.57	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	IGLV4-60	A0A075B6I1	120 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	LOC107984640	A0A0U1RRK4	108 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003		M0R2T5	61 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TSC22D2	O75157	780 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	AKAIN1	P0CW23	69 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	S100A4	P26447	101 aa	Known RBP	4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	AQP4	P55087	323 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SSBP1	Q04837	148 aa	Known RBP	4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	IQCJ	Q1A5X6	159 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	GCSAML	Q5JQS6	135 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	MIR17HG	Q75NE6	70 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	LINC00337	Q8N6G1	96 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	LYRM2	Q9NU23	88 aa	Predicted RBP	4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	OR5AC2	Q9NZP5	309 aa		4.56	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	GCG	P01275	180 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SULT1A2	P50226	295 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TAS2R30	P59541	319 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	KRTAP13-3	Q3SY46	172 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	GOLT1A	Q6ZVE7	132 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TSKU	Q8WUA8	353 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	LINC00526	Q96FQ7	95 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SFRP2	Q96HF1	295 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	HYLS1	Q96M11	299 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	NMES1	Q9C002	83 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	IL36B	Q9NZH7	164 aa		4.55	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	IGHV1-24	A0A0C4DH33	117 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TRBV6-1	A0A0K0K1D8	114 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003		A0A1B0GUV1	79 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	FAM25A	B3EWG3	89 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	FAM25C	B3EWG5	89 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	FAM25G	B3EWG6	89 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	MBP	P02686	304 aa	Predicted RBP	4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	FGF6	P10767	208 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SYCN	Q0VAF6	134 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TMEM128	Q5BJH2	165 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	OR11H4	Q8NGC9	324 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	AQP10	Q96PS8	301 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	NDFIP1	Q9BT67	221 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	DERL1	Q9BUN8	251 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	MRPL18	Q9H0U6	180 aa	Known RBP	4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	UQCC1	Q9NVA1	299 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	SCP2D1	Q9UJQ7	156 aa		4.54	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	UBE2L5P	A0A1B0GUS4	154 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003		H3BVH4	76 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	TSHB	P01222	138 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	UBE2L3	P68036	154 aa	Known RBP	4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	BAX	Q07812	192 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	EIF5AL1	Q6IS14	154 aa	Known RBP	4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	LINC00304	Q8N9R0	145 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	CMTM2	Q8TAZ6	248 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	C15orf40	Q8WUR7	153 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	OTOR	Q9NRC9	128 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	EXTL2	Q9UBQ6	330 aa		4.53	□□□□□ -1.68
RAPGEF4-208	ENST00000473003	IGKV3D-20	A0A0C4DH25	116 aa		4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	OR7C2	O60412	319 aa		4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	BCL2	P10415	239 aa		4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	RAB4B	P61018	213 aa		4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	KRTAP6-3	Q3LI67	103 aa		4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	CNBD2	Q96M20	576 aa		4.52	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	IGHV1-58	A0A0C4DH39	117 aa		4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	SFT2D2	O95562	160 aa		4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	CTAG1A	P78358	180 aa		4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	MRPS10	P82664	201 aa	Known RBP	4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	FOXI1	Q12951	378 aa		4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	ZFP69	Q49AA0	526 aa		4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	SMUG1	Q53HV7	270 aa		4.51	□□□□□ -1.69
RAPGEF4-208	ENST00000473003	SPANXN2	Q5MJ10	180 aa		4.51	□□□□□ -1.69

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