RNA–Protein interactions for RNA: ENST00000472888.1

RFXAP-202, Transcript of regulatory factor X associated protein, humanhuman

TSL 3

Gene RFXAP, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAP-202ENST00000472888 PHRF1Q9P1Y6 1649 aaKnown RBP1.32□□□□□ -2.2
RFXAP-202ENST00000472888 EML5Q05BV3 1969 aa1.32□□□□□ -2.2
RFXAP-202ENST00000472888 E9PCH4 1651 aa1.32□□□□□ -2.2
RFXAP-202ENST00000472888 CTTNBP2Q8WZ74 1663 aa1.32□□□□□ -2.2
RFXAP-202ENST00000472888 CASZ1Q86V15 1759 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 CDK12Q9NYV4 1490 aaPredicted RBP1.31□□□□□ -2.2
RFXAP-202ENST00000472888 MYH6P13533 1939 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 LOC100130705A0A1B0GUX0 176 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 F6UZH7 168 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 TFF1P04155 84 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 UBE2G1P62253 170 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 ZNF56Q15929 161 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 Q6AWC8 147 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 C10orf99Q6UWK7 81 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 Q86TA4 180 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 C4orf33Q8N1A6 199 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 LINC00208Q96KT6 92 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 COA4Q9NYJ1 87 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 SPAG17Q6Q759 2223 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 ZNF518AQ6AHZ1 1483 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 MBD5Q9P267 1494 aa1.31□□□□□ -2.2
RFXAP-202ENST00000472888 NCOA6Q14686 2063 aaPredicted RBP1.3□□□□□ -2.2
RFXAP-202ENST00000472888 SNRNP200O75643 2136 aaKnown RBP1.3□□□□□ -2.2
RFXAP-202ENST00000472888 TRAV12-3A0A0B4J271 114 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 A0A1W2PPM0 123 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 MCRIP1C9JLW8 97 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 APOC4-APOC2K7ER74 178 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 CORTO00230 105 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 APOC2P02655 101 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 S100PP25815 95 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 BET1LQ9NYM9 111 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 BLMP54132 1417 aaPredicted RBP1.3□□□□□ -2.2
RFXAP-202ENST00000472888 ZGRF1Q86YA3 2104 aa1.3□□□□□ -2.2
RFXAP-202ENST00000472888 MIF4GDA9UHW6 222 aaKnown RBP1.29□□□□□ -2.2
RFXAP-202ENST00000472888 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
RFXAP-202ENST00000472888 MED12Q93074 2177 aa1.29□□□□□ -2.2
RFXAP-202ENST00000472888 ASCC3Q8N3C0 2202 aaKnown RBP1.29□□□□□ -2.2
RFXAP-202ENST00000472888 PTPRMP28827 1452 aa1.29□□□□□ -2.2
RFXAP-202ENST00000472888 FXYD1O00168 92 aa1.28□□□□□ -2.2
RFXAP-202ENST00000472888 TNFP01375 233 aa1.28□□□□□ -2.2
RFXAP-202ENST00000472888 GNG4P50150 75 aa1.28□□□□□ -2.2
RFXAP-202ENST00000472888 PPP3R2Q96LZ3 170 aa1.28□□□□□ -2.2
RFXAP-202ENST00000472888 EIF4G3O43432 1585 aaKnown RBP1.27□□□□□ -2.21
RFXAP-202ENST00000472888 KTN1Q86UP2 1357 aaKnown RBP1.27□□□□□ -2.21
RFXAP-202ENST00000472888 TRBV10-3A0A0K0K1G6 114 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 RBAKDNA6NC62 111 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 SNAPC5O75971 98 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 S100A1P23297 94 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 TPPP2P59282 170 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 NPC2P61916 151 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 SSBP1Q04837 148 aaKnown RBP1.27□□□□□ -2.21
RFXAP-202ENST00000472888 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 ZNF818PQ6ZRF7 136 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 LSM10Q969L4 123 aaKnown RBP1.27□□□□□ -2.21
RFXAP-202ENST00000472888 IER3IP1Q9Y5U9 82 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 DLG5Q8TDM6 1919 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 AKAP11Q9UKA4 1901 aa1.27□□□□□ -2.21
RFXAP-202ENST00000472888 KIF13AQ9H1H9 1805 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 NALCNQ8IZF0 1738 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 FAM135AQ9P2D6 1515 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 IFT140Q96RY7 1462 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 FXYD6P3P58550 94 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 FAM74A4Q5TZK3 123 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 Q8N6K4 173 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 SPTSSBQ8NFR3 76 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 TMEM14BQ9NUH8 114 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 PLXNA2O75051 1894 aa1.26□□□□□ -2.21
RFXAP-202ENST00000472888 A2ML1A8K2U0 1454 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 SPAARA0A1B0GVQ0 90 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 KRTAP10-4P60372 401 aaPredicted RBP1.25□□□□□ -2.21
RFXAP-202ENST00000472888 PPP3R1P63098 170 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 CCL8P80075 99 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 S100A7L2Q5SY68 101 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 MRPL54Q6P161 138 aaKnown RBP1.25□□□□□ -2.21
RFXAP-202ENST00000472888 C8orf59Q8N0T1 100 aaPredicted RBP1.25□□□□□ -2.21
RFXAP-202ENST00000472888 Q8N8P6 123 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 TCEAL7Q9BRU2 100 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 PHLPP1O60346 1717 aa1.25□□□□□ -2.21
RFXAP-202ENST00000472888 FOCADQ5VW36 1801 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 CCL3L1P16619 93 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 ELOF1P60002 83 aaKnown RBP1.24□□□□□ -2.21
RFXAP-202ENST00000472888 CATR1Q13166 79 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 C20orf197Q8N268 126 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 C10orf82Q8WW14 230 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 PLAC4Q8WY50 150 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 KDM6BO15054 1643 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 DLEC1Q9Y238 1755 aa1.24□□□□□ -2.21
RFXAP-202ENST00000472888 COL6A6A6NMZ7 2263 aa1.23□□□□□ -2.21
RFXAP-202ENST00000472888 TRBV7-1A0A0A6YYK4 115 aa1.23□□□□□ -2.21
RFXAP-202ENST00000472888 C20orf202A1L168 122 aa1.23□□□□□ -2.21
RFXAP-202ENST00000472888 UBE2D1P51668 147 aa1.23□□□□□ -2.21
RFXAP-202ENST00000472888 COX7B2Q8TF08 81 aa1.23□□□□□ -2.21
RFXAP-202ENST00000472888 ZNF142P52746 1687 aaPredicted RBP1.23□□□□□ -2.21
RFXAP-202ENST00000472888 ATG2AQ2TAZ0 1938 aa1.23□□□□□ -2.21
RFXAP-202ENST00000472888 AHNAK2Q8IVF2 5795 aa1.22□□□□□ -2.21
RFXAP-202ENST00000472888 SIX6O95475 246 aa1.22□□□□□ -2.21
RFXAP-202ENST00000472888 RBM3P98179 157 aaKnown RBP1.22□□□□□ -2.21
RFXAP-202ENST00000472888 DSCR8Q96T75 97 aa1.22□□□□□ -2.21
RFXAP-202ENST00000472888 MYH7P12883 1935 aa1.22□□□□□ -2.21
RFXAP-202ENST00000472888 RIMS1Q86UR5 1692 aaKnown RBP1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms