RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 VWFP04275 2813 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 TRRAPQ9Y4A5 3859 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 KIR2DL5BA0A0G2JN68 375 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 KIR2DL5BA0A0G2JPC4 375 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 SPRY2O43597 315 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 NUPR1O60356 82 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 TNFRSF6BO95407 300 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 KIR2DL5AQ8N109 375 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 KIR2DL5BQ8NHK3 375 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 C16orf74Q96GX8 76 aa10.63□□□□□ -0.71
HIF3A-206ENST00000472815 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
HIF3A-206ENST00000472815 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
HIF3A-206ENST00000472815 NPYP01303 97 aa10.62□□□□□ -0.71
HIF3A-206ENST00000472815 GIG44P09565 113 aaPredicted RBP10.62□□□□□ -0.71
HIF3A-206ENST00000472815 SMIM6P0DI80 62 aa10.62□□□□□ -0.71
HIF3A-206ENST00000472815 POM121L12Q8N7R1 296 aa10.62□□□□□ -0.71
HIF3A-206ENST00000472815 C11orf72Q8NBR9 251 aa10.62□□□□□ -0.71
HIF3A-206ENST00000472815 F5H697 171 aa10.61□□□□□ -0.71
HIF3A-206ENST00000472815 RRN3P1Q2M238 152 aa10.61□□□□□ -0.71
HIF3A-206ENST00000472815 LOC389332A0A1B0GUA5 103 aa10.61□□□□□ -0.71
HIF3A-206ENST00000472815 FAM74A4Q5TZK3 123 aa10.61□□□□□ -0.71
HIF3A-206ENST00000472815 ZNF705AQ6ZN79 300 aaPredicted RBP10.61□□□□□ -0.71
HIF3A-206ENST00000472815 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
HIF3A-206ENST00000472815 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
HIF3A-206ENST00000472815 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
HIF3A-206ENST00000472815 A0A087WWL8 130 aa10.6□□□□□ -0.71
HIF3A-206ENST00000472815 H7C1H1 209 aa10.6□□□□□ -0.71
HIF3A-206ENST00000472815 RHODO00212 210 aa10.6□□□□□ -0.71
HIF3A-206ENST00000472815 IFI27P40305 119 aaPredicted RBP10.6□□□□□ -0.71
HIF3A-206ENST00000472815 ZNF56Q15929 161 aa10.6□□□□□ -0.71
HIF3A-206ENST00000472815 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
HIF3A-206ENST00000472815 TRAV26-2A0A0B4J265 109 aa10.59□□□□□ -0.71
HIF3A-206ENST00000472815 PRSS47A8MTI9 375 aa10.59□□□□□ -0.71
HIF3A-206ENST00000472815 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
HIF3A-206ENST00000472815 AZU1P20160 251 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 NRACQ8N912 160 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 RASL10AQ92737 203 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 JPT2Q9H910 190 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 SMIM9A6NGZ8 99 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 CRYGDP07320 174 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 LINC00315P59091 139 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 EGFEM1PQ0D2K5 195 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 DAZ2Q13117 558 aaKnown RBP10.58□□□□□ -0.72
HIF3A-206ENST00000472815 OXLD1Q5BKU9 147 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 FAM19A2Q8N3H0 131 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 Q8N8P6 123 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 IL17DQ8TAD2 202 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 URB1-AS1Q96HZ7 61 aa10.58□□□□□ -0.72
HIF3A-206ENST00000472815 K7EMI3 77 aa10.57□□□□□ -0.72
HIF3A-206ENST00000472815 PRM2P04554 102 aa10.57□□□□□ -0.72
HIF3A-206ENST00000472815 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
HIF3A-206ENST00000472815 SUMO2P61956 95 aaKnown RBP10.57□□□□□ -0.72
HIF3A-206ENST00000472815 TRGV1A0A0A0MS02 117 aa10.56□□□□□ -0.72
HIF3A-206ENST00000472815 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
HIF3A-206ENST00000472815 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
HIF3A-206ENST00000472815 LINC00518Q8N0U6 118 aa10.56□□□□□ -0.72
HIF3A-206ENST00000472815 ST20Q9HBF5 79 aa10.56□□□□□ -0.72
HIF3A-206ENST00000472815 PKD1L1Q8TDX9 2849 aa10.56□□□□□ -0.72
HIF3A-206ENST00000472815 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 ZFP2Q6ZN57 461 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 C12orf57Q99622 126 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 SMIM2Q9BVW6 85 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 EDA2RQ9HAV5 297 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 MRPL16Q9NX20 251 aaKnown RBP10.55□□□□□ -0.72
HIF3A-206ENST00000472815 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 CIDEAO60543 219 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 IGHV4-30-4P0DP06 118 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
HIF3A-206ENST00000472815 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
HIF3A-206ENST00000472815 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
HIF3A-206ENST00000472815 CMYA5Q8N3K9 4069 aa10.54□□□□□ -0.72
HIF3A-206ENST00000472815 RS1O15537 224 aa10.54□□□□□ -0.72
HIF3A-206ENST00000472815 HBDP02042 147 aa10.54□□□□□ -0.72
HIF3A-206ENST00000472815 G0S2P27469 103 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 PYY3Q5JQD4 70 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 Q6ZWC4 215 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 RPL39LQ96EH5 51 aaKnown RBP10.53□□□□□ -0.72
HIF3A-206ENST00000472815 OVOL2Q9BRP0 275 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 NOP10Q9NPE3 64 aaKnown RBP10.53□□□□□ -0.72
HIF3A-206ENST00000472815 NIT2Q9NQR4 276 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 DNHD1Q96M86 4753 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 TRBV6-5A0A0K0K1A5 114 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 M0QY20 66 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 KRTDAPP60985 99 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 LAGE3Q14657 143 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 PMCHL1Q16048 86 aa10.53□□□□□ -0.72
HIF3A-206ENST00000472815 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
HIF3A-206ENST00000472815 A8MZ25 164 aa10.52□□□□□ -0.73
HIF3A-206ENST00000472815 VCYO14598 125 aa10.52□□□□□ -0.73
HIF3A-206ENST00000472815 TCAPO15273 167 aa10.52□□□□□ -0.73
HIF3A-206ENST00000472815 SCGB1D1O95968 90 aa10.52□□□□□ -0.73
HIF3A-206ENST00000472815 KIR2DL4Q99706 377 aa10.52□□□□□ -0.73
HIF3A-206ENST00000472815 IGLV2-18A0A075B6J9 118 aa10.51□□□□□ -0.73
HIF3A-206ENST00000472815 BTF3P20290 206 aaKnown RBP10.51□□□□□ -0.73
HIF3A-206ENST00000472815 FCER1GP30273 86 aa10.51□□□□□ -0.73
HIF3A-206ENST00000472815 DEFB135Q30KP9 77 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms