RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 SLURP1P55000 103 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 SPINK13Q1W4C9 94 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 ERASQ7Z444 233 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 TRPT1Q86TN4 253 aaKnown RBP5.66□□□□□ -1.5
CCDC171-205ENST00000472806 KLHL30-AS1Q8NEE0 82 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 PTH2Q96A98 100 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 TMEM141Q96I45 108 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 CLUHP3Q96NS8 147 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 CSTL1Q9H114 145 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 HIGD1BQ9P298 99 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 CHTOPQ9Y3Y2 248 aaKnown RBP5.66□□□□□ -1.5
CCDC171-205ENST00000472806 ZZEF1O43149 2961 aa5.66□□□□□ -1.5
CCDC171-205ENST00000472806 DNAJC9-AS1A6NH13 148 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 IGKV3-20P01619 116 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 LINC00315P59091 139 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 DEFB131AP59861 70 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 ZNF415Q09FC8 603 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 RHOHQ15669 191 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 ZNF56Q15929 161 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 SUMO4Q6EEV6 95 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 AMTNQ6UX39 209 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 Q6ZSV7 163 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 C2orf91Q6ZV80 131 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 Q8N1Y9 231 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 RPL39LQ96EH5 51 aaKnown RBP5.65□□□□□ -1.5
CCDC171-205ENST00000472806 LINC00467Q9BRT7 94 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 TMEM160Q9NX00 188 aa5.65□□□□□ -1.5
CCDC171-205ENST00000472806 ZNF256Q9Y2P7 627 aaPredicted RBP5.65□□□□□ -1.5
CCDC171-205ENST00000472806 LRBAP50851 2863 aa5.65□□□□□ -1.51
CCDC171-205ENST00000472806 TRAV12-2A0A075B6T6 113 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 TRBV27A0A0K0K1C4 114 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 A8MWV9 139 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 H3BMM0 161 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 INSP01308 110 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 PLA2G1BP04054 148 aaKnown RBP5.64□□□□□ -1.51
CCDC171-205ENST00000472806 PLA2G2AP14555 144 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
CCDC171-205ENST00000472806 RIPPLY3P57055 190 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 HERVK_113P61574 105 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 TAL2Q16559 108 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 DEFB114Q30KQ6 69 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 ZC2HC1BQ5TFG8 222 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 WFDC11Q8NEX6 87 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 SPXQ9BT56 116 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 C16orf95Q9H693 158 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 EDA2RQ9HAV5 297 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
CCDC171-205ENST00000472806 HHLA3Q9XRX5 114 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 TSSC4Q9Y5U2 329 aaPredicted RBP5.64□□□□□ -1.51
CCDC171-205ENST00000472806 SELENOKQ9Y6D0 94 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 ITPR1Q14643 2758 aa5.64□□□□□ -1.51
CCDC171-205ENST00000472806 SDHAF1A6NFY7 115 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 H3BRM9 83 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 M0R2P5 195 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 RHODO00212 210 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 PTTG1IPP53801 180 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 UBE2V1Q13404 147 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 VAMP3Q15836 100 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 DEFB136Q30KP8 78 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 NSUN5P1Q3KNT7 163 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 ZNF876PQ49A33 203 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 ADAMTSL5Q6ZMM2 481 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 ZFP2Q6ZN57 461 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 GTSCR1Q86UQ5 136 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 TMEM61Q8N0U2 210 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 NEXN-AS1Q8NBZ9 246 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 ZNF418Q8TF45 676 aaPredicted RBP5.63□□□□□ -1.51
CCDC171-205ENST00000472806 DLX4Q92988 240 aaPredicted RBP5.63□□□□□ -1.51
CCDC171-205ENST00000472806 DUX3Q96PT4 197 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 MAP6D1Q9H9H5 199 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 YAE1D1Q9NRH1 226 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 MDFICQ9P1T7 246 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 ACACBO00763 2458 aa5.63□□□□□ -1.51
CCDC171-205ENST00000472806 RELNP78509 3460 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 A0A087WWL8 130 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 KNCNA6PVL3 124 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 OR11H12B2RN74 326 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 I3L3M4 83 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 TAX1BP3O14907 124 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 CRYGDP07320 174 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 FHL3Q13643 280 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 PMVKQ15126 192 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 FAM74A4Q5TZK3 123 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 C18orf65Q6ZTR6 163 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 OR11H2Q8NH07 326 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 TP53TG1Q9Y2A0 90 aa5.62□□□□□ -1.51
CCDC171-205ENST00000472806 PRSS29PA6NIE9 313 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 M0QY20 66 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 CCL24O00175 119 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 SPRY2O43597 315 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 NPSP0C0P6 89 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 CD300EQ496F6 205 aaPredicted RBP5.61□□□□□ -1.51
CCDC171-205ENST00000472806 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 GTF2H5Q6ZYL4 71 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 PCP2Q8IVA1 136 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 STHQ8IWL8 128 aa5.61□□□□□ -1.51
CCDC171-205ENST00000472806 DNAJC30Q96LL9 226 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms