RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 TRAV12-2A0A075B6T6 113 aa13.8□□□□□ -0.2
COL20A1-205ENST00000471582 A8MTW9 85 aa13.8□□□□□ -0.2
COL20A1-205ENST00000471582 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-205ENST00000471582 SPINK13Q1W4C9 94 aa13.8□□□□□ -0.2
COL20A1-205ENST00000471582 SYT8Q8NBV8 401 aa13.8□□□□□ -0.2
COL20A1-205ENST00000471582 COX11Q9Y6N1 276 aa13.8□□□□□ -0.2
COL20A1-205ENST00000471582 TRAV12-1A0A0B4J245 112 aa13.79□□□□□ -0.2
COL20A1-205ENST00000471582 A0A087WX48 190 aa13.78□□□□□ -0.2
COL20A1-205ENST00000471582 Q8N1Y9 231 aa13.78□□□□□ -0.2
COL20A1-205ENST00000471582 Q6ZSV7 163 aa13.78□□□□□ -0.2
COL20A1-205ENST00000471582 CSTL1Q9H114 145 aa13.77□□□□□ -0.21
COL20A1-205ENST00000471582 TRGV11A0A075B6L2 103 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 LINC01549A6NIU2 74 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 PLNP26678 52 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 SUMO4Q6EEV6 95 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
COL20A1-205ENST00000471582 MDFICQ9P1T7 246 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 NMUP48645 174 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 KLHL30-AS1Q8NEE0 82 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 SCGB3A1Q96QR1 104 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 ESM1Q9NQ30 184 aa13.76□□□□□ -0.21
COL20A1-205ENST00000471582 TMEM97Q5BJF2 176 aa13.75□□□□□ -0.21
COL20A1-205ENST00000471582 KHDC1LQ5JSQ8 128 aa13.75□□□□□ -0.21
COL20A1-205ENST00000471582 JPT2Q9H910 190 aa13.75□□□□□ -0.21
COL20A1-205ENST00000471582 TRBV6-5A0A0K0K1A5 114 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 NPSP0C0P6 89 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 POLR2KP53803 58 aaKnown RBP13.74□□□□□ -0.21
COL20A1-205ENST00000471582 DEFB131AP59861 70 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 SEC11AP67812 179 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 C2orf66Q6UXQ4 117 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 PCP2Q8IVA1 136 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 TMEM61Q8N0U2 210 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 DLX4Q92988 240 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-205ENST00000471582 A0A087WWL8 130 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 H3BMM0 161 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 H7C1H1 209 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 ZC2HC1BQ5TFG8 222 aa13.74□□□□□ -0.21
COL20A1-205ENST00000471582 ZNF418Q8TF45 676 aaPredicted RBP13.74□□□□□ -0.21
COL20A1-205ENST00000471582 F8VRH5 84 aa13.73□□□□□ -0.21
COL20A1-205ENST00000471582 RNASE1P07998 156 aaKnown RBP13.73□□□□□ -0.21
COL20A1-205ENST00000471582 HSD52Q0P140 79 aa13.73□□□□□ -0.21
COL20A1-205ENST00000471582 DYNLRB2Q8TF09 96 aa13.73□□□□□ -0.21
COL20A1-205ENST00000471582 SMR3AQ99954 134 aa13.73□□□□□ -0.21
COL20A1-205ENST00000471582 KNCNA6PVL3 124 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 VCYO14598 125 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 TAX1BP3O14907 124 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 ERASQ7Z444 233 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 NEXN-AS1Q8NBZ9 246 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 IGKV2D-26A0A0A0MRZ7 120 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 F5H697 171 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 LY6G6DO95868 133 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 TCTAP57738 103 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 AGRNO00468 2067 aa13.72□□□□□ -0.21
COL20A1-205ENST00000471582 TRBV27A0A0K0K1C4 114 aa13.71□□□□□ -0.21
COL20A1-205ENST00000471582 CRYGDP07320 174 aa13.71□□□□□ -0.21
COL20A1-205ENST00000471582 DEFB114Q30KQ6 69 aa13.71□□□□□ -0.21
COL20A1-205ENST00000471582 KIR2DL4Q99706 377 aa13.71□□□□□ -0.21
COL20A1-205ENST00000471582 HIGD1BQ9P298 99 aa13.71□□□□□ -0.21
COL20A1-205ENST00000471582 CYSLTR1Q9Y271 337 aa13.71□□□□□ -0.21
COL20A1-205ENST00000471582 ZNF256Q9Y2P7 627 aaPredicted RBP13.71□□□□□ -0.21
COL20A1-205ENST00000471582 CBY3A6NI87 242 aa13.7□□□□□ -0.22
COL20A1-205ENST00000471582 FAM74A4Q5TZK3 123 aa13.7□□□□□ -0.22
COL20A1-205ENST00000471582 Q6ZVH6 145 aa13.7□□□□□ -0.22
COL20A1-205ENST00000471582 GTSCR1Q86UQ5 136 aa13.7□□□□□ -0.22
COL20A1-205ENST00000471582 SPAG8Q99932 426 aaPredicted RBP13.7□□□□□ -0.22
COL20A1-205ENST00000471582 HIVEP2P31629 2446 aa13.7□□□□□ -0.22
COL20A1-205ENST00000471582 SDHAF1A6NFY7 115 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 M0QY20 66 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 RBMY1A1P0DJD3 496 aaKnown RBP13.69□□□□□ -0.22
COL20A1-205ENST00000471582 RBMY1CP0DJD4 496 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 FHL3Q13643 280 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 RBMY1FQ15415 496 aaKnown RBP13.69□□□□□ -0.22
COL20A1-205ENST00000471582 ZNF876PQ49A33 203 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 ZFP2Q6ZN57 461 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 BAALCQ8WXS3 180 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 MAP6D1Q9H9H5 199 aa13.69□□□□□ -0.22
COL20A1-205ENST00000471582 CHTOPQ9Y3Y2 248 aaKnown RBP13.69□□□□□ -0.22
COL20A1-205ENST00000471582 ZNF56Q15929 161 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
COL20A1-205ENST00000471582 JMJD8Q96S16 334 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 HIVEP1P15822 2718 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 MTORP42345 2549 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 TRAV25A0A0B4J276 109 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 RBMY1BA6NDE4 496 aaKnown RBP13.68□□□□□ -0.22
COL20A1-205ENST00000471582 A6NDN8 102 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 RBMY1EA6NEQ0 496 aaKnown RBP13.68□□□□□ -0.22
COL20A1-205ENST00000471582 RBMY1DP0C7P1 496 aaKnown RBP13.68□□□□□ -0.22
COL20A1-205ENST00000471582 RIPPLY3P57055 190 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 HILS1P60008 231 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 UBE2V1Q13404 147 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 NEGR1Q7Z3B1 354 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 C16orf95Q9H693 158 aa13.68□□□□□ -0.22
COL20A1-205ENST00000471582 ANK3Q12955 4377 aaKnown RBP13.68□□□□□ -0.22
COL20A1-205ENST00000471582 PIK3CD-AS1Q5SR53 167 aa13.67□□□□□ -0.22
COL20A1-205ENST00000471582 RAX2Q96IS3 184 aa13.67□□□□□ -0.22
COL20A1-205ENST00000471582 CLUHP3Q96NS8 147 aa13.67□□□□□ -0.22
COL20A1-205ENST00000471582 EDA2RQ9HAV5 297 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms