RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 OTOGLQ3ZCN5 2332 aa1.96□□□□□ -2.1
SMC5-202ENST00000471372 CNTRLQ7Z7A1 2325 aa1.95□□□□□ -2.1
SMC5-202ENST00000471372 TEX49A0A1B0GTD5 131 aa1.95□□□□□ -2.1
SMC5-202ENST00000471372 RPL7L1Q6DKI1 246 aaKnown RBP1.95□□□□□ -2.1
SMC5-202ENST00000471372 C10orf82Q8WW14 230 aa1.95□□□□□ -2.1
SMC5-202ENST00000471372 MYH7P12883 1935 aa1.95□□□□□ -2.1
SMC5-202ENST00000471372 MUC22E2RYF6 1773 aaPredicted RBP1.95□□□□□ -2.1
SMC5-202ENST00000471372 SPTBP11277 2137 aa1.94□□□□□ -2.1
SMC5-202ENST00000471372 BLMP54132 1417 aaPredicted RBP1.94□□□□□ -2.1
SMC5-202ENST00000471372 CYP2G1PQ6ZSU1 146 aa1.94□□□□□ -2.1
SMC5-202ENST00000471372 COPS9Q8WXC6 57 aa1.94□□□□□ -2.1
SMC5-202ENST00000471372 SPEF2Q9C093 1822 aa1.94□□□□□ -2.1
SMC5-202ENST00000471372 A0A1W2PPM0 123 aa1.93□□□□□ -2.1
SMC5-202ENST00000471372 FGF7P21781 194 aa1.93□□□□□ -2.1
SMC5-202ENST00000471372 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
SMC5-202ENST00000471372 CFTRP13569 1480 aa1.93□□□□□ -2.1
SMC5-202ENST00000471372 A6NIN4 97 aa1.92□□□□□ -2.1
SMC5-202ENST00000471372 AKAIN1P0CW23 69 aa1.92□□□□□ -2.1
SMC5-202ENST00000471372 BTG2P78543 158 aa1.92□□□□□ -2.1
SMC5-202ENST00000471372 RPRMQ9NS64 109 aa1.92□□□□□ -2.1
SMC5-202ENST00000471372 SCN3BQ9NY72 215 aa1.92□□□□□ -2.1
SMC5-202ENST00000471372 SERP1Q9Y6X1 66 aa1.92□□□□□ -2.1
SMC5-202ENST00000471372 NAIPQ13075 1403 aa1.91□□□□□ -2.1
SMC5-202ENST00000471372 AFDNP55196 1824 aaKnown RBP1.91□□□□□ -2.1
SMC5-202ENST00000471372 BCL9LQ86UU0 1499 aa1.91□□□□□ -2.1
SMC5-202ENST00000471372 C10orf99Q6UWK7 81 aa1.91□□□□□ -2.1
SMC5-202ENST00000471372 SPTSSBQ8NFR3 76 aa1.91□□□□□ -2.1
SMC5-202ENST00000471372 NAA60Q9H7X0 242 aa1.91□□□□□ -2.1
SMC5-202ENST00000471372 LAMA4Q16363 1823 aa1.91□□□□□ -2.1
SMC5-202ENST00000471372 CBLN1P23435 193 aa1.9□□□□□ -2.11
SMC5-202ENST00000471372 KLKP1Q107X0 134 aa1.9□□□□□ -2.11
SMC5-202ENST00000471372 PP6455Q8WZ26 134 aa1.9□□□□□ -2.11
SMC5-202ENST00000471372 NALCNQ8IZF0 1738 aa1.9□□□□□ -2.11
SMC5-202ENST00000471372 SPAG17Q6Q759 2223 aa1.9□□□□□ -2.11
SMC5-202ENST00000471372 ZNF142P52746 1687 aaPredicted RBP1.9□□□□□ -2.11
SMC5-202ENST00000471372 LY6G6CO95867 125 aa1.89□□□□□ -2.11
SMC5-202ENST00000471372 C20orf197Q8N268 126 aa1.89□□□□□ -2.11
SMC5-202ENST00000471372 DAPK1P53355 1430 aa1.89□□□□□ -2.11
SMC5-202ENST00000471372 ZNF518AQ6AHZ1 1483 aa1.88□□□□□ -2.11
SMC5-202ENST00000471372 MCRIP1C9JLW8 97 aa1.88□□□□□ -2.11
SMC5-202ENST00000471372 K7EIL1 84 aa1.88□□□□□ -2.11
SMC5-202ENST00000471372 ELOF1P60002 83 aaKnown RBP1.88□□□□□ -2.11
SMC5-202ENST00000471372 Q6AWC8 147 aa1.88□□□□□ -2.11
SMC5-202ENST00000471372 WDR7Q9Y4E6 1490 aa1.88□□□□□ -2.11
SMC5-202ENST00000471372 LAMB1P07942 1786 aa1.87□□□□□ -2.11
SMC5-202ENST00000471372 KMT2BQ9UMN6 2715 aaPredicted RBP1.87□□□□□ -2.11
SMC5-202ENST00000471372 ABCA4P78363 2273 aa1.87□□□□□ -2.11
SMC5-202ENST00000471372 SMG6Q86US8 1419 aaKnown RBP1.86□□□□□ -2.11
SMC5-202ENST00000471372 CCL3L1P16619 93 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 Q56UQ5 140 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 TMEM203Q969S6 136 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 TMEM14BQ9NUH8 114 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 COA4Q9NYJ1 87 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 BET1LQ9NYM9 111 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 GNG8Q9UK08 70 aa1.86□□□□□ -2.11
SMC5-202ENST00000471372 MYH9P35579 1960 aaKnown RBP1.86□□□□□ -2.11
SMC5-202ENST00000471372 MIF4GDA9UHW6 222 aaKnown RBP1.85□□□□□ -2.11
SMC5-202ENST00000471372 F6UZH7 168 aa1.85□□□□□ -2.11
SMC5-202ENST00000471372 IFNA17P01571 189 aa1.85□□□□□ -2.11
SMC5-202ENST00000471372 IFNGP01579 166 aa1.85□□□□□ -2.11
SMC5-202ENST00000471372 SPINT3P49223 89 aa1.85□□□□□ -2.11
SMC5-202ENST00000471372 RBM3P98179 157 aaKnown RBP1.85□□□□□ -2.11
SMC5-202ENST00000471372 Q8N8P6 123 aa1.85□□□□□ -2.11
SMC5-202ENST00000471372 BCORL1Q5H9F3 1711 aa1.84□□□□□ -2.11
SMC5-202ENST00000471372 SNAPC5O75971 98 aa1.84□□□□□ -2.11
SMC5-202ENST00000471372 UBE2D1P51668 147 aa1.84□□□□□ -2.11
SMC5-202ENST00000471372 INSL4Q14641 139 aa1.84□□□□□ -2.11
SMC5-202ENST00000471372 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
SMC5-202ENST00000471372 PPP1R1CQ8WVI7 109 aa1.83□□□□□ -2.12
SMC5-202ENST00000471372 A0A087WTM6 91 aa1.82□□□□□ -2.12
SMC5-202ENST00000471372 CORTO00230 105 aa1.82□□□□□ -2.12
SMC5-202ENST00000471372 COX7B2Q8TF08 81 aa1.82□□□□□ -2.12
SMC5-202ENST00000471372 TRBV10-3A0A0K0K1G6 114 aa1.81□□□□□ -2.12
SMC5-202ENST00000471372 SSBP1Q04837 148 aaKnown RBP1.81□□□□□ -2.12
SMC5-202ENST00000471372 CATR1Q13166 79 aa1.81□□□□□ -2.12
SMC5-202ENST00000471372 C4orf33Q8N1A6 199 aa1.81□□□□□ -2.12
SMC5-202ENST00000471372 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
SMC5-202ENST00000471372 A2ML1A8K2U0 1454 aa1.81□□□□□ -2.12
SMC5-202ENST00000471372 IFT140Q96RY7 1462 aa1.81□□□□□ -2.12
SMC5-202ENST00000471372 RBBP6Q7Z6E9 1792 aaKnown RBP1.8□□□□□ -2.12
SMC5-202ENST00000471372 CLPSL1A2RUU4 121 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 RBAKDNA6NC62 111 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 APOC4-APOC2K7ER74 178 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 APOC2P02655 101 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 S100A1P23297 94 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 ESPL1Q14674 2120 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 SPINK13Q1W4C9 94 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 C12orf73Q69YU5 71 aa1.8□□□□□ -2.12
SMC5-202ENST00000471372 ZDBF2Q9HCK1 2354 aa1.79□□□□□ -2.12
SMC5-202ENST00000471372 NRXN2Q9P2S2 1712 aa1.79□□□□□ -2.12
SMC5-202ENST00000471372 QRICH2Q9H0J4 1663 aa1.78□□□□□ -2.12
SMC5-202ENST00000471372 RPL37P61927 97 aaKnown RBP1.78□□□□□ -2.12
SMC5-202ENST00000471372 CCL8P80075 99 aa1.78□□□□□ -2.12
SMC5-202ENST00000471372 MRPL54Q6P161 138 aaKnown RBP1.78□□□□□ -2.12
SMC5-202ENST00000471372 DSCR8Q96T75 97 aa1.78□□□□□ -2.12
SMC5-202ENST00000471372 KIAA0100Q14667 2235 aaKnown RBP1.78□□□□□ -2.13
SMC5-202ENST00000471372 EIF4G3O43432 1585 aaKnown RBP1.77□□□□□ -2.13
SMC5-202ENST00000471372 HCG22E2RYF7 251 aa1.77□□□□□ -2.13
SMC5-202ENST00000471372 TPPP2P59282 170 aa1.77□□□□□ -2.13
SMC5-202ENST00000471372 FAM74A4Q5TZK3 123 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms