RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MAP1LC3AQ9H492 121 aa6.81□□□□□ -1.32
VPS52-216ENST00000471309 IGHV3OR16-12A0A075B7B8 117 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 KIR2DL5BA0A0G2JN68 375 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 KIR2DL5BA0A0G2JPC4 375 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 MGPP08493 103 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 LINC00614P0C842 121 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 AMTP48728 403 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 ZNF705AQ6ZN79 300 aaPredicted RBP6.8□□□□□ -1.32
VPS52-216ENST00000471309 KIR2DL5AQ8N109 375 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 NRACQ8N912 160 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 KIR2DL5BQ8NHK3 375 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 MUC4Q99102 2169 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 CSTL1Q9H114 145 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 AP5S1Q9NUS5 200 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 STAB1Q9NY15 2570 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 NBEAL1Q6ZS30 2694 aa6.8□□□□□ -1.32
VPS52-216ENST00000471309 TRAV26-2A0A0B4J265 109 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 LINC01546A6NGU7 62 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 PRSS47A8MTI9 375 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 A8MWV9 139 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 GAS8-AS1O95177 125 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 PPP1R17O96001 155 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 CRYGDP07320 174 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 PMCHP20382 165 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 APOC4P55056 127 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 EGFEM1PQ0D2K5 195 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 FA2HQ7L5A8 372 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 PRSS3P2Q8NHM4 247 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 C16orf74Q96GX8 76 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 JPT2Q9H910 190 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 ZMAT5Q9UDW3 170 aaKnown RBP6.79□□□□□ -1.32
VPS52-216ENST00000471309 TENM1Q9UKZ4 2725 aa6.79□□□□□ -1.32
VPS52-216ENST00000471309 ATRQ13535 2644 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 A0A087WWL8 130 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 PRM2P04554 102 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 GATA1P15976 413 aaPredicted RBP6.78□□□□□ -1.32
VPS52-216ENST00000471309 AZU1P20160 251 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 IFI27P40305 119 aaPredicted RBP6.78□□□□□ -1.32
VPS52-216ENST00000471309 ZNF56Q15929 161 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 SUMO4Q6EEV6 95 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 LINC00518Q8N0U6 118 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 RASL10AQ92737 203 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 C20orf78Q9BR46 151 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 EDA2RQ9HAV5 297 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
VPS52-216ENST00000471309 SORL1Q92673 2214 aa6.78□□□□□ -1.32
VPS52-216ENST00000471309 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 RHODO00212 210 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 DAZ2Q13117 558 aaKnown RBP6.77□□□□□ -1.33
VPS52-216ENST00000471309 RRN3P1Q2M238 152 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 LGALS9BQ3B8N2 356 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 FAM74A4Q5TZK3 123 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 Q6ZWC4 215 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 FAM19A2Q8N3H0 131 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 Q8N8P6 123 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 SMIM2Q9BVW6 85 aa6.77□□□□□ -1.33
VPS52-216ENST00000471309 MRPL16Q9NX20 251 aaKnown RBP6.77□□□□□ -1.33
VPS52-216ENST00000471309 IGLV2-18A0A075B6J9 118 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 TRBV6-5A0A0K0K1A5 114 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 PLAC8L1A1L4L8 177 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 F5H697 171 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 RS1O15537 224 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 KRTAP10-11P60412 298 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 SUMO2P61956 95 aaKnown RBP6.76□□□□□ -1.33
VPS52-216ENST00000471309 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
VPS52-216ENST00000471309 JOSD1Q15040 202 aaPredicted RBP6.76□□□□□ -1.33
VPS52-216ENST00000471309 PYY3Q5JQD4 70 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 UFSP1Q6NVU6 142 aa6.76□□□□□ -1.33
VPS52-216ENST00000471309 RPL39LQ96EH5 51 aaKnown RBP6.76□□□□□ -1.33
VPS52-216ENST00000471309 SMIM9A6NGZ8 99 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 H7C1H1 209 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 K7EMI3 77 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 M0QY20 66 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 IGHV4-30-4P0DP06 118 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 PMCHL1Q16048 86 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 CFAP126Q5VTH2 177 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 ZFP2Q6ZN57 461 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 C12orf57Q99622 126 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 OVOL2Q9BRP0 275 aa6.75□□□□□ -1.33
VPS52-216ENST00000471309 FBN1P35555 2871 aaKnown RBP6.74□□□□□ -1.33
VPS52-216ENST00000471309 A0A096LNJ9 63 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 TRGV1A0A0A0MS02 117 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 A8MZ25 164 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 LEPROTL1O95214 131 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 HBDP02042 147 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 SAMD5Q5TGI4 173 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 ST20Q9HBF5 79 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 X6R8D5 127 aa6.74□□□□□ -1.33
VPS52-216ENST00000471309 TRAV4A0A0B4J268 109 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 IGHV3-53P01767 116 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 KRTDAPP60985 99 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 DEFB135Q30KP9 77 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 Q6ZTI0 123 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
VPS52-216ENST00000471309 NIT2Q9NQR4 276 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
VPS52-216ENST00000471309 CIDEAO60543 219 aa6.72□□□□□ -1.33
VPS52-216ENST00000471309 C3orf79P0CE67 100 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms