RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 DUX3Q96PT4 197 aa8.63□□□□□ -1.03
SRGAP3-204ENST00000470951 CRYGDP07320 174 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 CD7P09564 240 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 SPTA1P02549 2419 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 LYNX1G3V0Z9 82 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 M0R2P5 195 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 LYNX1P0DP58 116 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 PSMB2P49721 201 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 DPH3P1Q9H4G8 78 aa8.62□□□□□ -1.03
SRGAP3-204ENST00000470951 TRAV8-2A0A0B4J237 113 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 MED14OSP0DP75 135 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 EMP1P54849 157 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 HERVK_113P61574 105 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 MINOS1Q5TGZ0 78 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 MINOS1-NBL1R4GNA1 71 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 POLEQ07864 2286 aa8.61□□□□□ -1.03
SRGAP3-204ENST00000470951 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 IGHV1-69DA0A0B4J2H0 117 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 CLPSL1A2RUU4 121 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 H3BVH4 76 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 C15orf32Q32M92 178 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 Q6ZQT7 251 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 PCNX1Q96RV3 2341 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 METTL26Q96S19 204 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 VKORC1Q9BQB6 163 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
SRGAP3-204ENST00000470951 IGHV3OR16-8A0A075B7F1 116 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 A8MWV9 139 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 HERVK_113P63121 156 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 TIMD4Q96H15 378 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 KLK15Q9H2R5 256 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 PRORYQ9H606 182 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 VMO1Q7Z5L0 202 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 U3KQE9 123 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 IGSF10Q6WRI0 2623 aa8.59□□□□□ -1.03
SRGAP3-204ENST00000470951 WNK2Q9Y3S1 2297 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV3-35A0A0C4DH35 117 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 ZFP2Q6ZN57 461 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 C9orf139Q6ZV77 190 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 PLEKHB2Q96CS7 222 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 KALRNO60229 2985 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 TRBV7-1A0A0A6YYK4 115 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 TRAV21A0A0B4J279 112 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 A0A0J9YY99 117 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 J3QLI3 93 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 POM121L12Q8N7R1 296 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 EDA2RQ9HAV5 297 aa8.58□□□□□ -1.04
SRGAP3-204ENST00000470951 C10orf126Q8N4M7 172 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 C3orf22Q8N5N4 141 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 Q8N9W7 124 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 EEF1AKMT3Q96AZ1 226 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 ODF3Q96PU9 254 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 RNF223E7ERA6 249 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 TCL1BO95988 128 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 C3orf56Q8N813 242 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 SLC25A29Q8N8R3 303 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 LINC00526Q96FQ7 95 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 PHLDA3Q9Y5J5 127 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 ARHGAP32A7KAX9 2087 aa8.57□□□□□ -1.04
SRGAP3-204ENST00000470951 TRBV7-7A0A0K0K1E9 115 aa8.56□□□□□ -1.04
SRGAP3-204ENST00000470951 LINC01548A6NM66 108 aa8.56□□□□□ -1.04
SRGAP3-204ENST00000470951 S100A4P26447 101 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-204ENST00000470951 RPL39LQ96EH5 51 aaKnown RBP8.56□□□□□ -1.04
SRGAP3-204ENST00000470951 TMEM141Q96I45 108 aa8.56□□□□□ -1.04
SRGAP3-204ENST00000470951 UQCRQO14949 82 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV3-30P01768 117 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV3-30-5P0DP03 117 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 PMVKQ15126 192 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 C9orf153Q5TBE3 101 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 ITLN2Q8WWU7 325 aaPredicted RBP8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 IGLV4-69A0A075B6H9 119 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV4OR15-8A0A075B7B6 117 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 A0A087WW49 117 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 IGHV3-66A0A0C4DH42 116 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 C11orf86A6NJI1 115 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 OVOL1O14753 267 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 CFC1BP0CG36 223 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 CFC1P0CG37 223 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 PRR9Q5T870 116 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 CLEC19AQ6UXS0 136 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 ZFAND2AQ8N6M9 145 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 COL6A6A6NMZ7 2263 aa8.55□□□□□ -1.04
SRGAP3-204ENST00000470951 ECSCRQ19T08 205 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 SERTAD4-AS1Q5TG53 156 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 C15orf53Q8NAA6 179 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 KLHL30-AS1Q8NEE0 82 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 CHCHD5Q9BSY4 110 aa8.54□□□□□ -1.04
SRGAP3-204ENST00000470951 PRO0628Q9UI54 55 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms