RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
SMC4-211ENST00000469858 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
SMC4-211ENST00000469858 GSN-AS1Q9NRJ2 163 aa13.2□□□□□ -0.3
SMC4-211ENST00000469858 FAM74A4Q5TZK3 123 aa13.2□□□□□ -0.3
SMC4-211ENST00000469858 FBN1P35555 2871 aaKnown RBP13.18□□□□□ -0.3
SMC4-211ENST00000469858 LINC00315P59091 139 aa13.18□□□□□ -0.3
SMC4-211ENST00000469858 KRTDAPP60985 99 aa13.18□□□□□ -0.3
SMC4-211ENST00000469858 C11orf72Q8NBR9 251 aa13.18□□□□□ -0.3
SMC4-211ENST00000469858 AZU1P20160 251 aa13.18□□□□□ -0.3
SMC4-211ENST00000469858 MORN3Q6PF18 240 aaPredicted RBP13.18□□□□□ -0.3
SMC4-211ENST00000469858 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
SMC4-211ENST00000469858 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
SMC4-211ENST00000469858 C12orf54Q6X4T0 127 aa13.17□□□□□ -0.3
SMC4-211ENST00000469858 RASL10AQ92737 203 aa13.17□□□□□ -0.3
SMC4-211ENST00000469858 TRRAPQ9Y4A5 3859 aa13.17□□□□□ -0.3
SMC4-211ENST00000469858 F5H697 171 aa13.16□□□□□ -0.3
SMC4-211ENST00000469858 M0R2P5 195 aa13.16□□□□□ -0.3
SMC4-211ENST00000469858 POM121L12Q8N7R1 296 aa13.16□□□□□ -0.3
SMC4-211ENST00000469858 RPL39LQ96EH5 51 aaKnown RBP13.16□□□□□ -0.3
SMC4-211ENST00000469858 GOLT1BQ9Y3E0 138 aa13.16□□□□□ -0.3
SMC4-211ENST00000469858 NXT2Q9NPJ8 142 aaKnown RBP13.16□□□□□ -0.3
SMC4-211ENST00000469858 CRYGDP07320 174 aa13.15□□□□□ -0.3
SMC4-211ENST00000469858 SUMO4Q6EEV6 95 aa13.15□□□□□ -0.3
SMC4-211ENST00000469858 SHISA2Q6UWI4 295 aa13.15□□□□□ -0.3
SMC4-211ENST00000469858 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
SMC4-211ENST00000469858 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
SMC4-211ENST00000469858 ZNF56Q15929 161 aa13.14□□□□□ -0.31
SMC4-211ENST00000469858 CSNK1G2-AS1Q8NCQ2 148 aa13.14□□□□□ -0.31
SMC4-211ENST00000469858 SPXQ9BT56 116 aa13.14□□□□□ -0.31
SMC4-211ENST00000469858 MRPL16Q9NX20 251 aaKnown RBP13.14□□□□□ -0.31
SMC4-211ENST00000469858 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
SMC4-211ENST00000469858 Q8N8P6 123 aa13.13□□□□□ -0.31
SMC4-211ENST00000469858 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
SMC4-211ENST00000469858 TMEM158Q8WZ71 300 aa13.13□□□□□ -0.31
SMC4-211ENST00000469858 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
SMC4-211ENST00000469858 MAST4O15021 2626 aa13.13□□□□□ -0.31
SMC4-211ENST00000469858 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
SMC4-211ENST00000469858 A0A096LNJ9 63 aa13.12□□□□□ -0.31
SMC4-211ENST00000469858 PRSS47A8MTI9 375 aa13.12□□□□□ -0.31
SMC4-211ENST00000469858 WIPF1O43516 503 aa13.12□□□□□ -0.31
SMC4-211ENST00000469858 SUMO2P61956 95 aaKnown RBP13.12□□□□□ -0.31
SMC4-211ENST00000469858 TMEM263Q8WUH6 116 aaKnown RBP13.12□□□□□ -0.31
SMC4-211ENST00000469858 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
SMC4-211ENST00000469858 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
SMC4-211ENST00000469858 PPP1R17O96001 155 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 PTH2Q96A98 100 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 C20orf78Q9BR46 151 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 IGHV3-73A0A0B4J1V6 119 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 A8MWV9 139 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 PIK3CD-AS1Q5SR53 167 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 IL17DQ8TAD2 202 aa13.11□□□□□ -0.31
SMC4-211ENST00000469858 PCP4L1A6NKN8 68 aa13.1□□□□□ -0.31
SMC4-211ENST00000469858 HBDP02042 147 aa13.1□□□□□ -0.31
SMC4-211ENST00000469858 BTF3P20290 206 aaKnown RBP13.1□□□□□ -0.31
SMC4-211ENST00000469858 ZNF705AQ6ZN79 300 aaPredicted RBP13.1□□□□□ -0.31
SMC4-211ENST00000469858 HSPB8Q9UJY1 196 aa13.1□□□□□ -0.31
SMC4-211ENST00000469858 TCAPO15273 167 aa13.09□□□□□ -0.31
SMC4-211ENST00000469858 OXLD1Q5BKU9 147 aa13.09□□□□□ -0.31
SMC4-211ENST00000469858 Q8N976 141 aa13.09□□□□□ -0.31
SMC4-211ENST00000469858 STAB1Q9NY15 2570 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 TRGV1A0A0A0MS02 117 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 M0QY20 66 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 S100A12P80511 92 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 RRN3P1Q2M238 152 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 CFAP126Q5VTH2 177 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 C16orf74Q96GX8 76 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 TMEM70Q9BUB7 260 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 ST20Q9HBF5 79 aa13.08□□□□□ -0.32
SMC4-211ENST00000469858 LAGE3Q14657 143 aa13.07□□□□□ -0.32
SMC4-211ENST00000469858 MAP1LC3CQ9BXW4 147 aa13.07□□□□□ -0.32
SMC4-211ENST00000469858 FCER1GP30273 86 aa13.06□□□□□ -0.32
SMC4-211ENST00000469858 UFSP1Q6NVU6 142 aa13.06□□□□□ -0.32
SMC4-211ENST00000469858 NEGR1Q7Z3B1 354 aa13.06□□□□□ -0.32
SMC4-211ENST00000469858 NOP10Q9NPE3 64 aaKnown RBP13.06□□□□□ -0.32
SMC4-211ENST00000469858 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
SMC4-211ENST00000469858 H0Y8G0 127 aa13.05□□□□□ -0.32
SMC4-211ENST00000469858 SYS1-DBNDD2H3BUS1 97 aa13.05□□□□□ -0.32
SMC4-211ENST00000469858 SPATA12Q7Z6I5 190 aa13.05□□□□□ -0.32
SMC4-211ENST00000469858 Q6ZTI0 123 aa13.05□□□□□ -0.32
SMC4-211ENST00000469858 SDHAF1A6NFY7 115 aa13.04□□□□□ -0.32
SMC4-211ENST00000469858 RHODO00212 210 aa13.04□□□□□ -0.32
SMC4-211ENST00000469858 RS1O15537 224 aa13.04□□□□□ -0.32
SMC4-211ENST00000469858 NDUFAF3Q9BU61 184 aa13.04□□□□□ -0.32
SMC4-211ENST00000469858 TRBV6-5A0A0K0K1A5 114 aa13.03□□□□□ -0.32
SMC4-211ENST00000469858 DAZ2Q13117 558 aaKnown RBP13.03□□□□□ -0.32
SMC4-211ENST00000469858 H7C1H1 209 aa13.03□□□□□ -0.32
SMC4-211ENST00000469858 NUDT3O95989 172 aa13.03□□□□□ -0.32
SMC4-211ENST00000469858 POLR2KP53803 58 aaKnown RBP13.03□□□□□ -0.32
SMC4-211ENST00000469858 APOC4P55056 127 aa13.03□□□□□ -0.32
SMC4-211ENST00000469858 TEX43Q6ZNM6 134 aa13.03□□□□□ -0.32
SMC4-211ENST00000469858 C18orf15Q96N68 181 aa13.03□□□□□ -0.32
SMC4-211ENST00000469858 KIR2DL5BA0A0G2JN68 375 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 KIR2DL5BA0A0G2JPC4 375 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 P0DMU3 169 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 FAM231AP0DMU4 169 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 FAM231CP0DMU5 169 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 RPL32P62910 135 aaKnown RBP13.02□□□□□ -0.32
SMC4-211ENST00000469858 LGALS9BQ3B8N2 356 aa13.02□□□□□ -0.32
SMC4-211ENST00000469858 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms