RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PARLQ9H300 379 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 CYTL1Q9NRR1 136 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 PSG8Q9UQ74 426 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 AGRNO00468 2067 aa4.41□□□□□ -1.7
PTCD3-208ENST00000469585 TRGV4A0A0C4DH28 118 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 FAM74A7A6NL05 159 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 FABP5P3A8MUU1 101 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 CRXO43186 299 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-208ENST00000469585 GCGP01275 180 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 ORM1P02763 201 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 AZU1P20160 251 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 SULT1A2P50226 295 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 RAB14P61106 215 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.71
PTCD3-208ENST00000469585 OR5I1Q13606 314 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 TMEM183BQ1AE95 376 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 MUC21Q5SSG8 566 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 FAM162BQ5T6X4 162 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 Q6AWC8 147 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 TMEM183AQ8IXX5 376 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.4□□□□□ -1.71
PTCD3-208ENST00000469585 RNASE8Q8TDE3 154 aaKnown RBP4.4□□□□□ -1.71
PTCD3-208ENST00000469585 MBD3L1Q8WWY6 194 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 LINC00467Q9BRT7 94 aa4.4□□□□□ -1.71
PTCD3-208ENST00000469585 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 B4DEV8 164 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 GGTLC3B5MD39 225 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 G3V3Q6 166 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 EIF3GO75821 320 aaKnown RBP eCLIP4.39□□□□□ -1.71
PTCD3-208ENST00000469585 PRB4P10163 310 aaPredicted RBP4.39□□□□□ -1.71
PTCD3-208ENST00000469585 ASIPP42127 132 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 CCL18P55774 89 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 TCL1AP56279 114 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 CD300CQ08708 224 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 ZNF767PQ75MW2 155 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 EIF5A2Q9GZV4 153 aaKnown RBP4.39□□□□□ -1.71
PTCD3-208ENST00000469585 VAX2Q9UIW0 290 aa4.39□□□□□ -1.71
PTCD3-208ENST00000469585 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 TRAV1-1A0A0B4J248 108 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 M0R2P5 195 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 MGST1P10620 155 aaKnown RBP4.38□□□□□ -1.71
PTCD3-208ENST00000469585 GNG4P50150 75 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 MEF2BQ02080 365 aaPredicted RBP4.38□□□□□ -1.71
PTCD3-208ENST00000469585 ZNF726P1Q15940 193 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 C12orf74Q32Q52 190 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 ALKAL2Q6UX46 152 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 SH2D6Q7Z4S9 175 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 Q86TA4 180 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 BAGE2Q86Y30 109 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 C9orf62Q8N4C0 152 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 ZFAND2AQ8N6M9 145 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 OR4C5Q8NGB2 326 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 C11orf52Q96A22 123 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 SMIM12Q96EX1 92 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 MED9Q9NWA0 146 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 CELA1Q9UNI1 258 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
PTCD3-208ENST00000469585 LCE6AA0A183 80 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 C9JCJ5 164 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 ZNF324O75467 553 aaPredicted RBP4.37□□□□□ -1.71
PTCD3-208ENST00000469585 SMIM17P0DL12 118 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 BCL2P10415 239 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 CEBPGP53567 150 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 RPS20P60866 119 aaKnown RBP4.37□□□□□ -1.71
PTCD3-208ENST00000469585 TDRG1Q3Y452 100 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 SOHLH1Q5JUK2 328 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 LGALS9CQ6DKI2 356 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 BORCS7Q96B45 105 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 FAM19A4Q96LR4 140 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 PRADC1Q9BSG0 188 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 KLF12Q9Y4X4 402 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 ICOSQ9Y6W8 199 aa4.37□□□□□ -1.71
PTCD3-208ENST00000469585 NBEAL2Q6ZNJ1 2754 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 TRBV6-1A0A0K0K1D8 114 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 A8MWV9 139 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 LTAP01374 205 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 P01737 135 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 SRIP30626 198 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 RPL35P42766 123 aaKnown RBP4.36□□□□□ -1.71
PTCD3-208ENST00000469585 KCNIP4Q6PIL6 250 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 SMIM15Q7Z3B0 74 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 ZFP82Q8N141 532 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 MRPL16Q9NX20 251 aaKnown RBP4.36□□□□□ -1.71
PTCD3-208ENST00000469585 PRO0255Q9UI72 69 aa4.36□□□□□ -1.71
PTCD3-208ENST00000469585 TRAV26-1A0A087WT03 109 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 TRAV4A0A0B4J268 109 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 RBFOX3A6NFN3 312 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 TMEM250H0YL14 139 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 H3BNG1 76 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 M0R036 132 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 SPINK4O60575 86 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 TYMSP04818 313 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 NKX2-5P52952 324 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-208ENST00000469585 CCL20P78556 96 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 PEA15Q15121 130 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 MRPL23Q16540 153 aaKnown RBP4.35□□□□□ -1.71
PTCD3-208ENST00000469585 RNF212Q495C1 297 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
PTCD3-208ENST00000469585 SPANXN1Q5VSR9 72 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms