RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 LINC00315P59091 139 aa14.9□□□□□ -0.02
TMEM53-207ENST00000468117 FAM74A4Q5TZK3 123 aa14.9□□□□□ -0.02
TMEM53-207ENST00000468117 FAM19A2Q8N3H0 131 aa14.9□□□□□ -0.02
TMEM53-207ENST00000468117 TNFRSF6BO95407 300 aa14.9□□□□□ -0.02
TMEM53-207ENST00000468117 PMCHP20382 165 aa14.9□□□□□ -0.02
TMEM53-207ENST00000468117 M0R2P5 195 aa14.89□□□□□ -0.03
TMEM53-207ENST00000468117 HSBP1O75506 76 aa14.89□□□□□ -0.03
TMEM53-207ENST00000468117 LINC00614P0C842 121 aa14.89□□□□□ -0.03
TMEM53-207ENST00000468117 IFI27P40305 119 aaPredicted RBP14.89□□□□□ -0.03
TMEM53-207ENST00000468117 RNASE8Q8TDE3 154 aaKnown RBP14.89□□□□□ -0.03
TMEM53-207ENST00000468117 MRAP2Q96G30 205 aa14.89□□□□□ -0.03
TMEM53-207ENST00000468117 AMTP48728 403 aa14.88□□□□□ -0.03
TMEM53-207ENST00000468117 PRSS3P2Q8NHM4 247 aa14.88□□□□□ -0.03
TMEM53-207ENST00000468117 ZNF705AQ6ZN79 300 aaPredicted RBP14.88□□□□□ -0.03
TMEM53-207ENST00000468117 NRACQ8N912 160 aa14.88□□□□□ -0.03
TMEM53-207ENST00000468117 TMEM263Q8WUH6 116 aaKnown RBP14.88□□□□□ -0.03
TMEM53-207ENST00000468117 LAMTOR2Q9Y2Q5 125 aa14.88□□□□□ -0.03
TMEM53-207ENST00000468117 CRYGDP07320 174 aa14.87□□□□□ -0.03
TMEM53-207ENST00000468117 KRTAP10-11P60412 298 aa14.87□□□□□ -0.03
TMEM53-207ENST00000468117 CHCHD1Q96BP2 118 aaKnown RBP14.87□□□□□ -0.03
TMEM53-207ENST00000468117 PMCHL1Q16048 86 aa14.87□□□□□ -0.03
TMEM53-207ENST00000468117 SPXQ9BT56 116 aa14.87□□□□□ -0.03
TMEM53-207ENST00000468117 MRPL16Q9NX20 251 aaKnown RBP14.87□□□□□ -0.03
TMEM53-207ENST00000468117 POM121L12Q8N7R1 296 aa14.86□□□□□ -0.03
TMEM53-207ENST00000468117 MAP1LC3AQ9H492 121 aa14.86□□□□□ -0.03
TMEM53-207ENST00000468117 F5H697 171 aa14.85□□□□□ -0.03
TMEM53-207ENST00000468117 IL17DQ8TAD2 202 aa14.85□□□□□ -0.03
TMEM53-207ENST00000468117 RASL10AQ92737 203 aa14.85□□□□□ -0.03
TMEM53-207ENST00000468117 FA2HQ7L5A8 372 aa14.85□□□□□ -0.03
TMEM53-207ENST00000468117 RPL39LQ96EH5 51 aaKnown RBP14.85□□□□□ -0.03
TMEM53-207ENST00000468117 AP5S1Q9NUS5 200 aa14.85□□□□□ -0.03
TMEM53-207ENST00000468117 SUMO4Q6EEV6 95 aa14.84□□□□□ -0.03
TMEM53-207ENST00000468117 NOTCH1P46531 2555 aa14.84□□□□□ -0.03
TMEM53-207ENST00000468117 IGHV4-30-4P0DP06 118 aa14.83□□□□□ -0.03
TMEM53-207ENST00000468117 EGFEM1PQ0D2K5 195 aa14.83□□□□□ -0.03
TMEM53-207ENST00000468117 ZNF56Q15929 161 aa14.83□□□□□ -0.03
TMEM53-207ENST00000468117 RRN3P1Q2M238 152 aa14.83□□□□□ -0.03
TMEM53-207ENST00000468117 PTH2Q96A98 100 aa14.83□□□□□ -0.03
TMEM53-207ENST00000468117 MDFIQ99750 246 aa14.83□□□□□ -0.03
TMEM53-207ENST00000468117 IGHV1-24A0A0C4DH33 117 aa14.83□□□□□ -0.04
TMEM53-207ENST00000468117 PIK3CD-AS1Q5SR53 167 aa14.83□□□□□ -0.04
TMEM53-207ENST00000468117 C16orf74Q96GX8 76 aa14.83□□□□□ -0.04
TMEM53-207ENST00000468117 Q6ZWC4 215 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 IGHV3-73A0A0B4J1V6 119 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 KIR2DL5BA0A0G2JN68 375 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 KIR2DL5BA0A0G2JPC4 375 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 PLAC8L1A1L4L8 177 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 A8MWV9 139 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 G3V4G9 280 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 PYY3Q5JQD4 70 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 KIR2DL5AQ8N109 375 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 KIR2DL5BQ8NHK3 375 aa14.82□□□□□ -0.04
TMEM53-207ENST00000468117 TRGV1A0A0A0MS02 117 aa14.81□□□□□ -0.04
TMEM53-207ENST00000468117 APOC4P55056 127 aa14.81□□□□□ -0.04
TMEM53-207ENST00000468117 NOP10Q9NPE3 64 aaKnown RBP14.81□□□□□ -0.04
TMEM53-207ENST00000468117 CFAP126Q5VTH2 177 aa14.8□□□□□ -0.04
TMEM53-207ENST00000468117 LINC00518Q8N0U6 118 aa14.8□□□□□ -0.04
TMEM53-207ENST00000468117 NBEAL1Q6ZS30 2694 aa14.8□□□□□ -0.04
TMEM53-207ENST00000468117 DEFB135Q30KP9 77 aa14.8□□□□□ -0.04
TMEM53-207ENST00000468117 Q6ZTI0 123 aa14.8□□□□□ -0.04
TMEM53-207ENST00000468117 SUMO2P61956 95 aaKnown RBP14.79□□□□□ -0.04
TMEM53-207ENST00000468117 NXT2Q9NPJ8 142 aaKnown RBP14.79□□□□□ -0.04
TMEM53-207ENST00000468117 DNAH3Q8TD57 4116 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 IGLV2-18A0A075B6J9 118 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 PRSS47A8MTI9 375 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 SMIM6P0DI80 62 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 DAZ2Q13117 558 aaKnown RBP14.78□□□□□ -0.04
TMEM53-207ENST00000468117 UFSP1Q6NVU6 142 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 M0QY20 66 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 Q8N8P6 123 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 C12orf57Q99622 126 aa14.78□□□□□ -0.04
TMEM53-207ENST00000468117 C20orf78Q9BR46 151 aa14.77□□□□□ -0.04
TMEM53-207ENST00000468117 X6R8D5 127 aa14.77□□□□□ -0.04
TMEM53-207ENST00000468117 PPP1R17O96001 155 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 EMP1P54849 157 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 SMIM2Q9BVW6 85 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 A0A096LNJ9 63 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 RS1O15537 224 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 LGALS9BQ3B8N2 356 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 NDUFAF3Q9BU61 184 aa14.76□□□□□ -0.05
TMEM53-207ENST00000468117 LINC01546A6NGU7 62 aa14.75□□□□□ -0.05
TMEM53-207ENST00000468117 TCAPO15273 167 aa14.75□□□□□ -0.05
TMEM53-207ENST00000468117 KRTDAPP60985 99 aa14.75□□□□□ -0.05
TMEM53-207ENST00000468117 JOSD1Q15040 202 aaPredicted RBP14.75□□□□□ -0.05
TMEM53-207ENST00000468117 Q6ZSN1 163 aa14.75□□□□□ -0.05
TMEM53-207ENST00000468117 ZMAT5Q9UDW3 170 aaKnown RBP14.75□□□□□ -0.05
TMEM53-207ENST00000468117 LEPROTL1O95214 131 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 SAMD5Q5TGI4 173 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 CDPF1Q6NVV7 123 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 LINC00173Q6ZV60 143 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 OVOL2Q9BRP0 275 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 ST20Q9HBF5 79 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 MGAM2Q2M2H8 2515 aa14.74□□□□□ -0.05
TMEM53-207ENST00000468117 RHODO00212 210 aa14.73□□□□□ -0.05
TMEM53-207ENST00000468117 OR4C5Q8NGB2 326 aa14.73□□□□□ -0.05
TMEM53-207ENST00000468117 GAGE12BA1L429 117 aa14.73□□□□□ -0.05
TMEM53-207ENST00000468117 GAGE7O76087 117 aa14.73□□□□□ -0.05
TMEM53-207ENST00000468117 GAGE12FP0CL80 117 aa14.73□□□□□ -0.05
TMEM53-207ENST00000468117 GAGE12GP0CL81 117 aa14.73□□□□□ -0.05
TMEM53-207ENST00000468117 GAGE12IP0CL82 117 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms