RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 POM121L12Q8N7R1 296 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 C11orf72Q8NBR9 251 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 MAP1LC3AQ9H492 121 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 GSN-AS1Q9NRJ2 163 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 STAB1Q9NY15 2570 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 MCRIP2Q9BUT9 160 aaKnown RBP13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 SMIM17P0DL12 118 aa13.64□□□□□ -0.23
CHRNA4-203ENST00000467563 AZU1P20160 251 aa13.64□□□□□ -0.23
CHRNA4-203ENST00000467563 ZNF415Q09FC8 603 aa13.64□□□□□ -0.23
CHRNA4-203ENST00000467563 RASL10AQ92737 203 aa13.63□□□□□ -0.23
CHRNA4-203ENST00000467563 C3orf56Q8N813 242 aa13.63□□□□□ -0.23
CHRNA4-203ENST00000467563 CRYGDP07320 174 aa13.62□□□□□ -0.23
CHRNA4-203ENST00000467563 KRTDAPP60985 99 aa13.62□□□□□ -0.23
CHRNA4-203ENST00000467563 FAM74A4Q5TZK3 123 aa13.62□□□□□ -0.23
CHRNA4-203ENST00000467563 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
CHRNA4-203ENST00000467563 RPL39LQ96EH5 51 aaKnown RBP13.62□□□□□ -0.23
CHRNA4-203ENST00000467563 IGLV2-18A0A075B6J9 118 aa13.61□□□□□ -0.23
CHRNA4-203ENST00000467563 M0R2P5 195 aa13.61□□□□□ -0.23
CHRNA4-203ENST00000467563 MORN3Q6PF18 240 aaPredicted RBP13.61□□□□□ -0.23
CHRNA4-203ENST00000467563 A0A096LNJ9 63 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 PRSS47A8MTI9 375 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 WIPF1O43516 503 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 C3orf79P0CE67 100 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 LINC00173Q6ZV60 143 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 SCGB1D1O95968 90 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 SUMO4Q6EEV6 95 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 NXT2Q9NPJ8 142 aaKnown RBP13.6□□□□□ -0.23
CHRNA4-203ENST00000467563 LINC01546A6NGU7 62 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 RNASE8Q8TDE3 154 aaKnown RBP13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 F5H697 171 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 LEPROTL1O95214 131 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 SHISA2Q6UWI4 295 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 Q8N8P6 123 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 SPXQ9BT56 116 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 GOLT1BQ9Y3E0 138 aa13.59□□□□□ -0.23
CHRNA4-203ENST00000467563 C12orf54Q6X4T0 127 aa13.58□□□□□ -0.24
CHRNA4-203ENST00000467563 PTH2Q96A98 100 aa13.58□□□□□ -0.24
CHRNA4-203ENST00000467563 SUMO2P61956 95 aaKnown RBP13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 Q8N976 141 aa13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 IL17DQ8TAD2 202 aa13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 MRPL16Q9NX20 251 aaKnown RBP13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 PIK3CD-AS1Q5SR53 167 aa13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 CSTL1Q9H114 145 aa13.57□□□□□ -0.24
CHRNA4-203ENST00000467563 ZNF56Q15929 161 aa13.56□□□□□ -0.24
CHRNA4-203ENST00000467563 ZNF705AQ6ZN79 300 aaPredicted RBP13.56□□□□□ -0.24
CHRNA4-203ENST00000467563 TMEM263Q8WUH6 116 aaKnown RBP13.56□□□□□ -0.24
CHRNA4-203ENST00000467563 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
CHRNA4-203ENST00000467563 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
CHRNA4-203ENST00000467563 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
CHRNA4-203ENST00000467563 UFSP1Q6NVU6 142 aa13.55□□□□□ -0.24
CHRNA4-203ENST00000467563 A8MWV9 139 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 M0QY20 66 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 PPP1R17O96001 155 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 IGHV3-73A0A0B4J1V6 119 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 TCAPO15273 167 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 HBDP02042 147 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 BTF3P20290 206 aaKnown RBP13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 CFAP126Q5VTH2 177 aa13.54□□□□□ -0.24
CHRNA4-203ENST00000467563 PLAC8L1A1L4L8 177 aa13.53□□□□□ -0.24
CHRNA4-203ENST00000467563 OXLD1Q5BKU9 147 aa13.53□□□□□ -0.24
CHRNA4-203ENST00000467563 SPATA12Q7Z6I5 190 aa13.53□□□□□ -0.24
CHRNA4-203ENST00000467563 HSPB8Q9UJY1 196 aa13.53□□□□□ -0.24
CHRNA4-203ENST00000467563 PCP4L1A6NKN8 68 aa13.52□□□□□ -0.24
CHRNA4-203ENST00000467563 TMEM70Q9BUB7 260 aa13.52□□□□□ -0.24
CHRNA4-203ENST00000467563 CMYA5Q8N3K9 4069 aa13.52□□□□□ -0.25
CHRNA4-203ENST00000467563 NACAE9PAV3 2078 aa13.52□□□□□ -0.25
CHRNA4-203ENST00000467563 PKD1L1Q8TDX9 2849 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 FCER1GP30273 86 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 C16orf74Q96GX8 76 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 ST20Q9HBF5 79 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 TRGV1A0A0A0MS02 117 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 LAGE3Q14657 143 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 NEGR1Q7Z3B1 354 aa13.51□□□□□ -0.25
CHRNA4-203ENST00000467563 RS1O15537 224 aa13.5□□□□□ -0.25
CHRNA4-203ENST00000467563 POLR2KP53803 58 aaKnown RBP13.5□□□□□ -0.25
CHRNA4-203ENST00000467563 Q6ZTI0 123 aa13.5□□□□□ -0.25
CHRNA4-203ENST00000467563 NOP10Q9NPE3 64 aaKnown RBP13.5□□□□□ -0.25
CHRNA4-203ENST00000467563 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 S100A12P80511 92 aa13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 TEX43Q6ZNM6 134 aa13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 Q6ZSN1 163 aa13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 NDUFAF3Q9BU61 184 aa13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 MAP1LC3CQ9BXW4 147 aa13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 RPL32P62910 135 aaKnown RBP13.49□□□□□ -0.25
CHRNA4-203ENST00000467563 SDHAF1A6NFY7 115 aa13.48□□□□□ -0.25
CHRNA4-203ENST00000467563 EDA2RQ9HAV5 297 aa13.48□□□□□ -0.25
CHRNA4-203ENST00000467563 P0DMU3 169 aa13.48□□□□□ -0.25
CHRNA4-203ENST00000467563 FAM231AP0DMU4 169 aa13.48□□□□□ -0.25
CHRNA4-203ENST00000467563 FAM231CP0DMU5 169 aa13.48□□□□□ -0.25
CHRNA4-203ENST00000467563 NBEAL2Q6ZNJ1 2754 aa13.47□□□□□ -0.25
CHRNA4-203ENST00000467563 H0Y8G0 127 aa13.47□□□□□ -0.25
CHRNA4-203ENST00000467563 RHODO00212 210 aa13.47□□□□□ -0.25
CHRNA4-203ENST00000467563 KRTAP10-11P60412 298 aa13.47□□□□□ -0.25
CHRNA4-203ENST00000467563 LGALS9BQ3B8N2 356 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms