RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 GDF5OSQ5U4N7 250 aa3.65□□□□□ -1.83
PTCD3-207ENST00000467273 OR8I2Q8N0Y5 310 aa3.65□□□□□ -1.83
PTCD3-207ENST00000467273 OR2G3Q8NGZ4 309 aa3.65□□□□□ -1.83
PTCD3-207ENST00000467273 NKX6-2Q9C056 277 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-207ENST00000467273 CCL28Q9NRJ3 127 aa3.65□□□□□ -1.83
PTCD3-207ENST00000467273 HIGD1AQ9Y241 93 aa3.65□□□□□ -1.83
PTCD3-207ENST00000467273 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
PTCD3-207ENST00000467273 TIMM8BQ9Y5J9 83 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-207ENST00000467273 A0A1B0GXF2 115 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 PLAC8L1A1L4L8 177 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-207ENST00000467273 TNFSF12O43508 249 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 KRASP01116 189 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 PPYP01298 95 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 IGHV3-48P01763 117 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 SMIM17P0DL12 118 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 PRSS3P35030 304 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 FUSP35637 526 aaKnown RBP eCLIP3.64□□□□□ -1.83
PTCD3-207ENST00000467273 SNCAP37840 140 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 ETV6P41212 452 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 FXYD7P58549 80 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF876PQ49A33 203 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 LINC00242Q5T6M2 205 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 AADACL3Q5VUY0 350 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 EBLN2Q6P2I7 272 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 PRSS54Q6PEW0 395 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 Q6ZN92 141 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF493Q6ZR52 646 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 Q6ZSA8 131 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM256Q8N2U0 113 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM229BQ8NBD8 167 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF555Q8NEP9 628 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 OR4B1Q8NGF8 309 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 GPR146Q96CH1 333 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 SLC35B3Q9H1N7 401 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 KLK11Q9UBX7 282 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 V9GY05 133 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 LRP2P98164 4655 aa3.64□□□□□ -1.83
PTCD3-207ENST00000467273 A0A0J9YX75 114 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 IFITM5A6NNB3 132 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 ISLRO14498 428 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 INSP01308 110 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 IGKV1-17P01599 117 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 MYL9P24844 172 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 FCGR2CP31995 323 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 YPEL3P61236 119 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-207ENST00000467273 GNGT1P63211 74 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 HAMPP81172 84 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 IFITM3Q01628 133 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 COL5A1-AS1Q5SY13 56 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 IBA57Q5T440 356 aaKnown RBP3.63□□□□□ -1.83
PTCD3-207ENST00000467273 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 SCGB1D4Q6XE38 83 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF818PQ6ZRF7 136 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 LINC00612Q8N6U2 182 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 OR51H1Q8NH63 302 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 C16orf74Q96GX8 76 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 SMIM8Q96KF7 97 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 C9orf85Q96MD7 179 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 MGLLQ99685 303 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 RPRMQ9NS64 109 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 SCN3BQ9NY72 215 aa3.63□□□□□ -1.83
PTCD3-207ENST00000467273 DUSP14O95147 198 aaKnown RBP3.62□□□□□ -1.83
PTCD3-207ENST00000467273 SNRPCP09234 159 aaKnown RBP3.62□□□□□ -1.83
PTCD3-207ENST00000467273 OPRK1P41145 380 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 RAB5CP51148 216 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 TAS2R20P59543 309 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 KRTAP10-4P60372 401 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-207ENST00000467273 CACNG7P62955 275 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 JOSD1Q15040 202 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-207ENST00000467273 AMTNQ6UX39 209 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 NOTCH2NLQ7Z3S9 236 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 EXOC3-AS1Q8N2X6 119 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 BPIFB6Q8NFQ5 453 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 PHYHIPLQ96FC7 376 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 LINC00052Q96N35 136 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 TMEM147Q9BVK8 224 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF471Q9BX82 626 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-207ENST00000467273 C20orf85Q9H1P6 137 aa3.62□□□□□ -1.83
PTCD3-207ENST00000467273 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 A0A087X002 238 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 TRAV8-6A0A0B4J262 113 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 IGHV3OR16-9A0A0B4J2B5 98 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 ZNF705GA8MUZ8 300 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 E9PLD3 99 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 SOCS3O14543 225 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 PDCD5O14737 125 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 PGLYRP1O75594 196 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 NXPH4O95158 308 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 IGLC1P0CG04 106 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 CFC1BP0CG36 223 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 CFC1P0CG37 223 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 SLC25A4P12235 298 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 LPAR6P43657 344 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 GNG4P50150 75 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 DEFA1P59665 94 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 DAZ2Q13117 558 aaKnown RBP3.61□□□□□ -1.83
PTCD3-207ENST00000467273 TDRG1Q3Y452 100 aa3.61□□□□□ -1.83
PTCD3-207ENST00000467273 FAAP20Q6NZ36 180 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms