RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 FAM231DQ6ZW35 169 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 LINC00528Q8N1L1 170 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 ODF3Q96PU9 254 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 SLC50A1Q9BRV3 221 aa9.69□□□□□ -0.86
CXCR4-203ENST00000466288 TRBV19A0A075B6N1 114 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 TGIF2-C20orf24A0A0A6YYL0 155 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 PGPA6NDG6 321 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 K7EQM0 130 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 IGHV3-53P01767 116 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
CXCR4-203ENST00000466288 UBE2G1P62253 170 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
CXCR4-203ENST00000466288 MRPL23Q16540 153 aaKnown RBP9.68□□□□□ -0.86
CXCR4-203ENST00000466288 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 IL36BQ9NZH7 164 aa9.68□□□□□ -0.86
CXCR4-203ENST00000466288 C5orf52A6NGY3 159 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 SLC17A3O00476 420 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 IGLC2P0DOY2 106 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 LEPP41159 167 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 Q6ZSA8 131 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 Q8N814 137 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 CMTM2Q8TAZ6 248 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
CXCR4-203ENST00000466288 CRYGDP07320 174 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 SLAQ13239 276 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 FHL2Q14192 279 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 ANXA2RQ3ZCQ2 193 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 BAGE2Q86Y30 109 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 C8orf49Q96NF6 230 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 H3BTX0 84 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 K7EN84 100 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 TCRAP04437 139 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 TCL1AP56279 114 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 BLNKQ8WV28 456 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 AAMDCQ9H7C9 122 aa9.66□□□□□ -0.86
CXCR4-203ENST00000466288 K7EQD1 137 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 PSCAO43653 123 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 OXTP01178 125 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 IGLV2-8P01709 118 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 VGLL1Q99990 258 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 V9GYV3 84 aa9.65□□□□□ -0.87
CXCR4-203ENST00000466288 LRP2P98164 4655 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 C7orf71A4D174 169 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 LTAP01374 205 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 S100A8P05109 93 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 CSN1S1P47710 185 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
CXCR4-203ENST00000466288 CT83Q5H943 113 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 IBA57Q5T440 356 aaKnown RBP9.64□□□□□ -0.87
CXCR4-203ENST00000466288 RASL11AQ6T310 242 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 TMEM75Q8N9X5 138 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 MRPL16Q9NX20 251 aaKnown RBP9.64□□□□□ -0.87
CXCR4-203ENST00000466288 ZNF492Q9P255 531 aa9.64□□□□□ -0.87
CXCR4-203ENST00000466288 PGPEP1LA6NFU8 196 aa9.63□□□□□ -0.87
CXCR4-203ENST00000466288 KLLNB2CW77 178 aa9.63□□□□□ -0.87
CXCR4-203ENST00000466288 TRGC2P03986 189 aa9.63□□□□□ -0.87
CXCR4-203ENST00000466288 ZFP82Q8N141 532 aa9.63□□□□□ -0.87
CXCR4-203ENST00000466288 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 FAM231BA6NCW3 169 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 PHOX2AO14813 284 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 MT-ND6P03923 174 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 SRIP30626 198 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 TMEM183AQ8IXX5 376 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 TP53TG3Q9ULZ0 132 aa9.62□□□□□ -0.87
CXCR4-203ENST00000466288 GATCO43716 136 aaKnown RBP9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BKO60814 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BJP06899 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 MGST1P10620 155 aaKnown RBP9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BOP23527 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BBP33778 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BDP58876 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 SNRPEP62304 92 aaKnown RBP9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BCP62807 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST2H2BEQ16778 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.61□□□□□ -0.87
CXCR4-203ENST00000466288 WDR73Q6P4I2 378 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BHQ93079 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 FAM19A4Q96LR4 140 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BNQ99877 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 HIST1H2BMQ99879 126 aa9.61□□□□□ -0.87
CXCR4-203ENST00000466288 ERCC8Q13216 396 aa9.6□□□□□ -0.87
CXCR4-203ENST00000466288 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
CXCR4-203ENST00000466288 COX8CQ7Z4L0 72 aa9.6□□□□□ -0.87
CXCR4-203ENST00000466288 MRPL53Q96EL3 112 aaKnown RBP9.6□□□□□ -0.87
CXCR4-203ENST00000466288 GNB1LQ9BYB4 327 aa9.6□□□□□ -0.87
CXCR4-203ENST00000466288 GFRA4Q9GZZ7 299 aa9.6□□□□□ -0.87
CXCR4-203ENST00000466288 IBA57-AS1B1ANH7 110 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 TRGC1P0CF51 173 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 GYPEP15421 78 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 ZNF415Q09FC8 603 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 SAPCD1Q5SSQ6 148 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 DAZAP1Q96EP5 407 aaKnown RBP9.59□□□□□ -0.87
CXCR4-203ENST00000466288 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 IGHV3-38A0A0C4DH36 116 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 RBAKDNA6NC62 111 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 A8MWL6 223 aa9.59□□□□□ -0.87
CXCR4-203ENST00000466288 DIRC3C9JPN6 131 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms