RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 BCL9LQ86UU0 1499 aa1.17□□□□□ -2.22
GPNMB-205ENST00000463011 FOCADQ5VW36 1801 aa1.17□□□□□ -2.22
GPNMB-205ENST00000463011 MYH13Q9UKX3 1938 aa1.17□□□□□ -2.22
GPNMB-205ENST00000463011 MIF4GDA9UHW6 222 aaKnown RBP1.16□□□□□ -2.22
GPNMB-205ENST00000463011 MCRIP1C9JLW8 97 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 CBLN1P23435 193 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 BTG2P78543 158 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 Q6AWC8 147 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 PP6455Q8WZ26 134 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 TMEM203Q969S6 136 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 SCN3BQ9NY72 215 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 GNG8Q9UK08 70 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 ZNF518AQ6AHZ1 1483 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 PLXNA2O75051 1894 aa1.16□□□□□ -2.22
GPNMB-205ENST00000463011 NALCNQ8IZF0 1738 aa1.15□□□□□ -2.22
GPNMB-205ENST00000463011 MUC6Q6W4X9 2439 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 F6UZH7 168 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 SNAPC5O75971 98 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 LY6G6CO95867 125 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 KLKP1Q107X0 134 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 C20orf197Q8N268 126 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 DLEC1Q9Y238 1755 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 MYH6P13533 1939 aa1.15□□□□□ -2.23
GPNMB-205ENST00000463011 NCOA6Q14686 2063 aaPredicted RBP1.14□□□□□ -2.23
GPNMB-205ENST00000463011 IFNA17P01571 189 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 IFNGP01579 166 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 SPINT3P49223 89 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 KRTAP21-2Q3LI59 83 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 C10orf99Q6UWK7 81 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 PLAC4Q8WY50 150 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 COA4Q9NYJ1 87 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 SPEF2Q9C093 1822 aa1.14□□□□□ -2.23
GPNMB-205ENST00000463011 FLG2Q5D862 2391 aaPredicted RBP1.14□□□□□ -2.23
GPNMB-205ENST00000463011 MUC22E2RYF6 1773 aaPredicted RBP1.13□□□□□ -2.23
GPNMB-205ENST00000463011 EIF4G3O43432 1585 aaKnown RBP1.13□□□□□ -2.23
GPNMB-205ENST00000463011 CCL3L1P16619 93 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 S100A1P23297 94 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 ELOF1P60002 83 aaKnown RBP1.13□□□□□ -2.23
GPNMB-205ENST00000463011 RBM3P98179 157 aaKnown RBP1.13□□□□□ -2.23
GPNMB-205ENST00000463011 INSL4Q14641 139 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 Q56UQ5 140 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 Q8N8P6 123 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 PPP1R1CQ8WVI7 109 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 TMEM14BQ9NUH8 114 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 BET1LQ9NYM9 111 aa1.13□□□□□ -2.23
GPNMB-205ENST00000463011 ZNF142P52746 1687 aaPredicted RBP1.13□□□□□ -2.23
GPNMB-205ENST00000463011 COL6A6A6NMZ7 2263 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 TRBV10-3A0A0K0K1G6 114 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 CATR1Q13166 79 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 C12orf73Q69YU5 71 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 AKAP11Q9UKA4 1901 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 BCORL1Q5H9F3 1711 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 ZGRF1Q86YA3 2104 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 A2ML1A8K2U0 1454 aa1.12□□□□□ -2.23
GPNMB-205ENST00000463011 K7EIL1 84 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 APOC4-APOC2K7ER74 178 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 CORTO00230 105 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 APOC2P02655 101 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 UBE2D1P51668 147 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 TPPP2P59282 170 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 SSBP1Q04837 148 aaKnown RBP1.11□□□□□ -2.23
GPNMB-205ENST00000463011 WHAMMP3Q1A5X7 153 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 MRPL54Q6P161 138 aaKnown RBP1.11□□□□□ -2.23
GPNMB-205ENST00000463011 C4orf33Q8N1A6 199 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 COX7B2Q8TF08 81 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 DSCR8Q96T75 97 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 IFT140Q96RY7 1462 aa1.11□□□□□ -2.23
GPNMB-205ENST00000463011 CITO14578 2027 aa1.1□□□□□ -2.23
GPNMB-205ENST00000463011 PRRC2BQ5JSZ5 2229 aaKnown RBP1.1□□□□□ -2.23
GPNMB-205ENST00000463011 RBAKDNA6NC62 111 aa1.1□□□□□ -2.23
GPNMB-205ENST00000463011 GNG4P50150 75 aa1.1□□□□□ -2.23
GPNMB-205ENST00000463011 FAM74A4Q5TZK3 123 aa1.1□□□□□ -2.23
GPNMB-205ENST00000463011 MYOM2P54296 1465 aa1.1□□□□□ -2.23
GPNMB-205ENST00000463011 KTN1Q86UP2 1357 aaKnown RBP1.09□□□□□ -2.23
GPNMB-205ENST00000463011 LAMB1P07942 1786 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 CASKIN1Q8WXD9 1431 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 A0A087WTM6 91 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 PIGBOS1A0A0B4J2F0 54 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 MRPS10P82664 201 aaKnown RBP1.09□□□□□ -2.23
GPNMB-205ENST00000463011 SPINK13Q1W4C9 94 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 C9orf153Q5TBE3 101 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 CGREF1Q99674 301 aa1.09□□□□□ -2.23
GPNMB-205ENST00000463011 QRICH2Q9H0J4 1663 aa1.09□□□□□ -2.24
GPNMB-205ENST00000463011 FAM135AQ9P2D6 1515 aa1.09□□□□□ -2.24
GPNMB-205ENST00000463011 TRAV13-2A0A0B4J235 113 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 CLPSL1A2RUU4 121 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 HCG22E2RYF7 251 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 TNFP01375 233 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 PPP3R1P63098 170 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 CCL8P80075 99 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 ZNF818PQ6ZRF7 136 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 PPP3R2Q96LZ3 170 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 LINC00312Q9Y6C7 94 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 V9GYV3 84 aa1.08□□□□□ -2.24
GPNMB-205ENST00000463011 RBBP6Q7Z6E9 1792 aaKnown RBP1.08□□□□□ -2.24
GPNMB-205ENST00000463011 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
GPNMB-205ENST00000463011 AFDNP55196 1824 aaKnown RBP1.08□□□□□ -2.24
GPNMB-205ENST00000463011 CNTRLQ7Z7A1 2325 aa1.07□□□□□ -2.24
GPNMB-205ENST00000463011 SNRNP200O75643 2136 aaKnown RBP1.07□□□□□ -2.24
GPNMB-205ENST00000463011 CUL7Q14999 1698 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms