RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 COX8CQ7Z4L0 72 aa11.98□□□□□ -0.49
MRPL28-207ENST00000461550 ISOC2Q96AB3 205 aa11.98□□□□□ -0.49
MRPL28-207ENST00000461550 TMEM242Q9NWH2 141 aa11.98□□□□□ -0.49
MRPL28-207ENST00000461550 DYNC1H1Q14204 4646 aaKnown RBP11.97□□□□□ -0.49
MRPL28-207ENST00000461550 NXPH4O95158 308 aa11.97□□□□□ -0.49
MRPL28-207ENST00000461550 SLAQ13239 276 aa11.97□□□□□ -0.49
MRPL28-207ENST00000461550 KCNS1Q96KK3 526 aa11.97□□□□□ -0.49
MRPL28-207ENST00000461550 MLST8Q9BVC4 326 aa11.97□□□□□ -0.49
MRPL28-207ENST00000461550 TRAV4A0A0B4J268 109 aa11.96□□□□□ -0.49
MRPL28-207ENST00000461550 PGPEP1LA6NFU8 196 aa11.96□□□□□ -0.49
MRPL28-207ENST00000461550 MRPL23Q16540 153 aaKnown RBP11.96□□□□□ -0.49
MRPL28-207ENST00000461550 FAM162BQ5T6X4 162 aa11.96□□□□□ -0.49
MRPL28-207ENST00000461550 OR4C5Q8NGB2 326 aa11.96□□□□□ -0.49
MRPL28-207ENST00000461550 SMIM7Q9BQ49 75 aa11.96□□□□□ -0.49
MRPL28-207ENST00000461550 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 IGKV3D-20A0A0C4DH25 116 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 ZNF727A8MUV8 499 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 C9JCJ5 164 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 K7EQD1 137 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 ORM1P02763 201 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 MGST1P10620 155 aaKnown RBP11.95□□□□□ -0.5
MRPL28-207ENST00000461550 GYPEP15421 78 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 GNG4P50150 75 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 PNRC1Q12796 327 aaPredicted RBP11.95□□□□□ -0.5
MRPL28-207ENST00000461550 PRR27Q6MZM9 219 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 LOC100131303A0A0U1RQF7 123 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 SIVA1O15304 175 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 IGLV2-8P01709 118 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 RPS10P46783 165 aaKnown RBP11.95□□□□□ -0.5
MRPL28-207ENST00000461550 LYPD5Q6UWN5 251 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 NEGR1Q7Z3B1 354 aa11.95□□□□□ -0.5
MRPL28-207ENST00000461550 TMSB15BA0A087X1C1 80 aa11.94□□□□□ -0.5
MRPL28-207ENST00000461550 SRIP30626 198 aa11.94□□□□□ -0.5
MRPL28-207ENST00000461550 ELOBQ15370 118 aa11.94□□□□□ -0.5
MRPL28-207ENST00000461550 ZNF876PQ49A33 203 aa11.94□□□□□ -0.5
MRPL28-207ENST00000461550 A0A1W2PPQ1 181 aa11.93□□□□□ -0.5
MRPL28-207ENST00000461550 MED14OSP0DP75 135 aa11.93□□□□□ -0.5
MRPL28-207ENST00000461550 LINC00315P59091 139 aa11.93□□□□□ -0.5
MRPL28-207ENST00000461550 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
MRPL28-207ENST00000461550 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
MRPL28-207ENST00000461550 C9orf85Q96MD7 179 aa11.92□□□□□ -0.5
MRPL28-207ENST00000461550 CTDSP1Q9GZU7 261 aa11.92□□□□□ -0.5
MRPL28-207ENST00000461550 IGHV3-73A0A0B4J1V6 119 aa11.91□□□□□ -0.5
MRPL28-207ENST00000461550 RNASE3P12724 160 aaKnown RBP11.91□□□□□ -0.5
MRPL28-207ENST00000461550 RPL19P84098 196 aaKnown RBP11.91□□□□□ -0.5
MRPL28-207ENST00000461550 LBHQ53QV2 105 aaPredicted RBP11.91□□□□□ -0.5
MRPL28-207ENST00000461550 PYY3Q5JQD4 70 aa11.91□□□□□ -0.5
MRPL28-207ENST00000461550 C16orf90A8MZG2 172 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 PPP1R2P9O14990 202 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 GATA1P15976 413 aaPredicted RBP11.9□□□□□ -0.5
MRPL28-207ENST00000461550 NDUFA6P56556 154 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 TMEM241Q24JQ0 296 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 CFAP126Q5VTH2 177 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 NAT8Q9UHE5 227 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 TNFRSF18Q9Y5U5 241 aa11.9□□□□□ -0.5
MRPL28-207ENST00000461550 TRBV24-1A0A075B6N3 115 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 IFITM10A6NMD0 228 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 S100A4P26447 101 aaKnown RBP11.89□□□□□ -0.51
MRPL28-207ENST00000461550 LINC01559Q495D7 138 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST3H2BBQ8N257 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 SMIM12Q96EX1 92 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 KRTAP17-1Q9BYP8 105 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 K7EN84 100 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 RS1O15537 224 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BKO60814 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BJP06899 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BOP23527 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BBP33778 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 ASIPP42127 132 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BDP58876 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 PKIAP61925 76 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BCP62807 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST2H2BEQ16778 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BHQ93079 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 DAZAP1Q96EP5 407 aaKnown RBP11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BNQ99877 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 HIST1H2BMQ99879 126 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 LY96Q9Y6Y9 160 aa11.89□□□□□ -0.51
MRPL28-207ENST00000461550 RPL23P62829 140 aaKnown RBP11.88□□□□□ -0.51
MRPL28-207ENST00000461550 SPATA12Q7Z6I5 190 aa11.88□□□□□ -0.51
MRPL28-207ENST00000461550 LINC01551Q86U37 167 aa11.88□□□□□ -0.51
MRPL28-207ENST00000461550 SLC25A29Q8N8R3 303 aa11.88□□□□□ -0.51
MRPL28-207ENST00000461550 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
MRPL28-207ENST00000461550 H3BVH4 76 aa11.87□□□□□ -0.51
MRPL28-207ENST00000461550 CXCL1P09341 107 aa11.87□□□□□ -0.51
MRPL28-207ENST00000461550 Q6ZRN7 208 aaPredicted RBP11.87□□□□□ -0.51
MRPL28-207ENST00000461550 ARMS2P0C7Q2 107 aa11.86□□□□□ -0.51
MRPL28-207ENST00000461550 ADIRFQ15847 76 aa11.86□□□□□ -0.51
MRPL28-207ENST00000461550 NUDT10Q8NFP7 164 aa11.86□□□□□ -0.51
MRPL28-207ENST00000461550 NUDT11Q96G61 164 aa11.86□□□□□ -0.51
MRPL28-207ENST00000461550 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
MRPL28-207ENST00000461550 P01737 135 aa11.85□□□□□ -0.51
MRPL28-207ENST00000461550 KRTAP10-2P60368 255 aa11.85□□□□□ -0.51
MRPL28-207ENST00000461550 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
MRPL28-207ENST00000461550 OR10D4PQ8NGN7 298 aa11.85□□□□□ -0.51
MRPL28-207ENST00000461550 TSTD3H0UI37 97 aa11.84□□□□□ -0.51
MRPL28-207ENST00000461550 PHOX2AO14813 284 aa11.84□□□□□ -0.51
MRPL28-207ENST00000461550 GZMBP10144 247 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 739.3 ms