RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 C16orf74Q96GX8 76 aa17.66■□□□□ 0.42
U2AF1-204ENST00000459639 FABP4P15090 132 aa17.65■□□□□ 0.42
U2AF1-204ENST00000459639 AKR1D1P51857 326 aa17.65■□□□□ 0.42
U2AF1-204ENST00000459639 NIT1Q86X76 327 aa17.65■□□□□ 0.42
U2AF1-204ENST00000459639 TMEM18Q96B42 140 aa17.65■□□□□ 0.42
U2AF1-204ENST00000459639 NDUFAF3Q9BU61 184 aa17.65■□□□□ 0.42
U2AF1-204ENST00000459639 TRAV26-2A0A0B4J265 109 aa17.64■□□□□ 0.42
U2AF1-204ENST00000459639 RNASEKQ6P5S7 137 aaKnown RBP17.64■□□□□ 0.42
U2AF1-204ENST00000459639 CHCHD1Q96BP2 118 aaKnown RBP17.64■□□□□ 0.42
U2AF1-204ENST00000459639 URB1-AS1Q96HZ7 61 aa17.64■□□□□ 0.42
U2AF1-204ENST00000459639 A0A087WWL8 130 aa17.64■□□□□ 0.41
U2AF1-204ENST00000459639 GAS8-AS1O95177 125 aa17.64■□□□□ 0.41
U2AF1-204ENST00000459639 TNFRSF6BO95407 300 aa17.64■□□□□ 0.41
U2AF1-204ENST00000459639 RRN3P1Q2M238 152 aa17.64■□□□□ 0.41
U2AF1-204ENST00000459639 A8MWV9 139 aa17.63■□□□□ 0.41
U2AF1-204ENST00000459639 CRYGDP07320 174 aa17.63■□□□□ 0.41
U2AF1-204ENST00000459639 IGHV4-30-4P0DP06 118 aa17.63■□□□□ 0.41
U2AF1-204ENST00000459639 NRACQ8N912 160 aa17.63■□□□□ 0.41
U2AF1-204ENST00000459639 MAP1LC3AQ9H492 121 aa17.63■□□□□ 0.41
U2AF1-204ENST00000459639 LINC00614P0C842 121 aa17.62■□□□□ 0.41
U2AF1-204ENST00000459639 GATA1P15976 413 aaPredicted RBP17.62■□□□□ 0.41
U2AF1-204ENST00000459639 MDFIQ99750 246 aa17.62■□□□□ 0.41
U2AF1-204ENST00000459639 HSBP1O75506 76 aa17.61■□□□□ 0.41
U2AF1-204ENST00000459639 FAM74A4Q5TZK3 123 aa17.61■□□□□ 0.41
U2AF1-204ENST00000459639 PACRGQ96M98 296 aaPredicted RBP17.61■□□□□ 0.41
U2AF1-204ENST00000459639 SAMD10Q9BYL1 202 aa17.61■□□□□ 0.41
U2AF1-204ENST00000459639 PRSS3P2Q8NHM4 247 aa17.61■□□□□ 0.41
U2AF1-204ENST00000459639 RASL10AQ92737 203 aa17.61■□□□□ 0.41
U2AF1-204ENST00000459639 MRPL16Q9NX20 251 aaKnown RBP17.61■□□□□ 0.41
U2AF1-204ENST00000459639 DAZ2Q13117 558 aaKnown RBP17.6■□□□□ 0.41
U2AF1-204ENST00000459639 SAMD5Q5TGI4 173 aa17.6■□□□□ 0.41
U2AF1-204ENST00000459639 PLAC8L1A1L4L8 177 aa17.59■□□□□ 0.41
U2AF1-204ENST00000459639 PRSS47A8MTI9 375 aa17.59■□□□□ 0.41
U2AF1-204ENST00000459639 PPP1R17O96001 155 aa17.59■□□□□ 0.41
U2AF1-204ENST00000459639 FA2HQ7L5A8 372 aa17.59■□□□□ 0.41
U2AF1-204ENST00000459639 LOC389332A0A1B0GUA5 103 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 G3V4G9 280 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 PMCHP20382 165 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 IFI27P40305 119 aaPredicted RBP17.58■□□□□ 0.41
U2AF1-204ENST00000459639 AMTP48728 403 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 LGALS9BQ3B8N2 356 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 SUMO4Q6EEV6 95 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 OR10D4PQ8NGN7 298 aa17.58■□□□□ 0.41
U2AF1-204ENST00000459639 NACAE9PAV3 2078 aa17.58■□□□□ 0.4
U2AF1-204ENST00000459639 SMIM9A6NGZ8 99 aa17.58■□□□□ 0.4
U2AF1-204ENST00000459639 A8MZ25 164 aa17.58■□□□□ 0.4
U2AF1-204ENST00000459639 F5H697 171 aa17.58■□□□□ 0.4
U2AF1-204ENST00000459639 ZNF56Q15929 161 aa17.58■□□□□ 0.4
U2AF1-204ENST00000459639 NXT2Q9NPJ8 142 aaKnown RBP17.57■□□□□ 0.4
U2AF1-204ENST00000459639 AP5S1Q9NUS5 200 aa17.57■□□□□ 0.4
U2AF1-204ENST00000459639 RHODO00212 210 aa17.56■□□□□ 0.4
U2AF1-204ENST00000459639 RS1O15537 224 aa17.56■□□□□ 0.4
U2AF1-204ENST00000459639 CFAP126Q5VTH2 177 aa17.56■□□□□ 0.4
U2AF1-204ENST00000459639 UFSP1Q6NVU6 142 aa17.56■□□□□ 0.4
U2AF1-204ENST00000459639 TRGV1A0A0A0MS02 117 aa17.55■□□□□ 0.4
U2AF1-204ENST00000459639 FAM19A2Q8N3H0 131 aa17.55■□□□□ 0.4
U2AF1-204ENST00000459639 C20orf78Q9BR46 151 aa17.55■□□□□ 0.4
U2AF1-204ENST00000459639 OVOL2Q9BRP0 275 aa17.55■□□□□ 0.4
U2AF1-204ENST00000459639 X6R8D5 127 aa17.55■□□□□ 0.4
U2AF1-204ENST00000459639 DEFB135Q30KP9 77 aa17.55■□□□□ 0.4
U2AF1-204ENST00000459639 RPL39LQ96EH5 51 aaKnown RBP17.55■□□□□ 0.4
U2AF1-204ENST00000459639 NOP10Q9NPE3 64 aaKnown RBP17.55■□□□□ 0.4
U2AF1-204ENST00000459639 EDA2RQ9HAV5 297 aa17.54■□□□□ 0.4
U2AF1-204ENST00000459639 IGHV1-24A0A0C4DH33 117 aa17.53■□□□□ 0.4
U2AF1-204ENST00000459639 LINC01546A6NGU7 62 aa17.53■□□□□ 0.4
U2AF1-204ENST00000459639 SUMO2P61956 95 aaKnown RBP17.53■□□□□ 0.4
U2AF1-204ENST00000459639 Q8N8P6 123 aa17.53■□□□□ 0.4
U2AF1-204ENST00000459639 Q6ZTI0 123 aa17.52■□□□□ 0.4
U2AF1-204ENST00000459639 Q6ZWC4 215 aa17.52■□□□□ 0.4
U2AF1-204ENST00000459639 IGLV2-18A0A075B6J9 118 aa17.52■□□□□ 0.39
U2AF1-204ENST00000459639 M0QY20 66 aa17.52■□□□□ 0.39
U2AF1-204ENST00000459639 ZFP2Q6ZN57 461 aa17.52■□□□□ 0.39
U2AF1-204ENST00000459639 SMIM2Q9BVW6 85 aa17.52■□□□□ 0.39
U2AF1-204ENST00000459639 H7C1H1 209 aa17.51■□□□□ 0.39
U2AF1-204ENST00000459639 TRBV6-5A0A0K0K1A5 114 aa17.49■□□□□ 0.39
U2AF1-204ENST00000459639 RPL32P62910 135 aaKnown RBP17.49■□□□□ 0.39
U2AF1-204ENST00000459639 PMCHL1Q16048 86 aa17.49■□□□□ 0.39
U2AF1-204ENST00000459639 LURAP1LQ8IV03 231 aa17.49■□□□□ 0.39
U2AF1-204ENST00000459639 ST20Q9HBF5 79 aa17.49■□□□□ 0.39
U2AF1-204ENST00000459639 ANK2Q01484 3957 aa17.49■□□□□ 0.39
U2AF1-204ENST00000459639 PKD1L1Q8TDX9 2849 aa17.49■□□□□ 0.39
U2AF1-204ENST00000459639 IGHV3-73A0A0B4J1V6 119 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 TRAV4A0A0B4J268 109 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 OR4C5Q8NGB2 326 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 RNF183Q96D59 192 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 CMYA5Q8N3K9 4069 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 SMIM6P0DI80 62 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 OR11H2Q8NH07 326 aa17.48■□□□□ 0.39
U2AF1-204ENST00000459639 NIT2Q9NQR4 276 aa17.47■□□□□ 0.39
U2AF1-204ENST00000459639 IGHV3-53P01767 116 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 GAGE12BA1L429 117 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 K7EMI3 77 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 CIDEAO60543 219 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 GAGE7O76087 117 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 GAGE12FP0CL80 117 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 GAGE12GP0CL81 117 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 GAGE12IP0CL82 117 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 MIFP14174 115 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 TMEM70Q9BUB7 260 aa17.45■□□□□ 0.38
U2AF1-204ENST00000459639 A0A096LNJ9 63 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms