RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 CNTRLQ7Z7A1 2325 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 IGHV1-46P01743 117 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 DAZ2Q13117 558 aaKnown RBP6.3□□□□□ -1.4
SMCO1-202ENST00000452776 NSUN5P1Q3KNT7 163 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
SMCO1-202ENST00000452776 LINC00528Q8N1L1 170 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 SAP25Q8TEE9 199 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 EEF1AKMT3Q96AZ1 226 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 VSIG2Q96IQ7 327 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 DSCR8Q96T75 97 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 DEFB127Q9H1M4 99 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 DAZ1Q9NQZ3 744 aaKnown RBP6.3□□□□□ -1.4
SMCO1-202ENST00000452776 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
SMCO1-202ENST00000452776 SLC25A15Q9Y619 301 aa6.3□□□□□ -1.4
SMCO1-202ENST00000452776 RANBP2P49792 3224 aaKnown RBP6.3□□□□□ -1.4
SMCO1-202ENST00000452776 IGLV11-55A0A075B6I3 123 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 IGHG2P01859 326 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 APELAP0DMC3 54 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 CCL4P13236 92 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 TIRAPP58753 221 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 ATP5EP2Q5VTU8 51 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 CNEP1R1Q8N9A8 125 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 LITAFQ99732 161 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 KAAG1Q9UBP8 84 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 IGHV1-58A0A0C4DH39 117 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 NXPH4O95158 308 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 IGHV3-30-3P0DP02 117 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 MDS2Q8NDY4 140 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 SPRR3Q9UBC9 169 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 KNL1Q8NG31 2342 aa6.29□□□□□ -1.4
SMCO1-202ENST00000452776 SDK2Q58EX2 2172 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 USP17L23D6RBM5 183 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 BUB1B-PAK6H3BSN5 160 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 DNAL4O96015 105 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 NPBQ8NG41 125 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 C20orf173Q96LM9 149 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 HES7Q9BYE0 225 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
SMCO1-202ENST00000452776 IGHV3-72A0A0B4J1Y9 119 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 FAM236DA0A1B0GTK5 79 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 PRAC2D3DTV9 90 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 LY6LH3BQJ8 138 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 IGLV1-47P01700 117 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 FAM236CP0DP71 79 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 SPTBN5Q9NRC6 3674 aaKnown RBP6.27□□□□□ -1.41
SMCO1-202ENST00000452776 DSCAML1Q8TD84 2053 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 KNCNA6PVL3 124 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 NBR2O15453 112 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 OXTP01178 125 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 CTSGP08311 255 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 RNASE4P34096 147 aaKnown RBP6.27□□□□□ -1.41
SMCO1-202ENST00000452776 PMS2CLQ68D20 193 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 TMEM86BQ8N661 226 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 LY6G5BQ8NDX9 201 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 FANCD2OSQ96PS1 177 aa6.27□□□□□ -1.41
SMCO1-202ENST00000452776 KIAA0100Q14667 2235 aaKnown RBP6.27□□□□□ -1.41
SMCO1-202ENST00000452776 ASXL3Q9C0F0 2248 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 TRBV10-3A0A0K0K1G6 114 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 RBMY1BA6NDE4 496 aaKnown RBP6.26□□□□□ -1.41
SMCO1-202ENST00000452776 RBMY1EA6NEQ0 496 aaKnown RBP6.26□□□□□ -1.41
SMCO1-202ENST00000452776 M0R1B8 84 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 SPRY2O43597 315 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 RBMY1DP0C7P1 496 aaKnown RBP6.26□□□□□ -1.41
SMCO1-202ENST00000452776 RBMY1A1P0DJD3 496 aaKnown RBP6.26□□□□□ -1.41
SMCO1-202ENST00000452776 RBMY1CP0DJD4 496 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 ATP5EP56381 51 aaPredicted RBP6.26□□□□□ -1.41
SMCO1-202ENST00000452776 RBMY1FQ15415 496 aaKnown RBP6.26□□□□□ -1.41
SMCO1-202ENST00000452776 MSMPQ1L6U9 139 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 TMEM243Q9BU79 118 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 BRWD1Q9NSI6 2320 aa6.26□□□□□ -1.41
SMCO1-202ENST00000452776 IGHV3OR16-10A0A075B7F0 116 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 IGFL4Q6B9Z1 124 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 LINC00336Q6ZUF6 198 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 C9orf139Q6ZV77 190 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 C20orf203Q8NBC4 194 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 NUP37Q8NFH4 326 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 C10orf105Q8TEF2 133 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 PRO3102Q9H379 93 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 LAMTOR3Q9UHA4 124 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 KIF25-AS1Q9Y6Z4 181 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 RAI1Q7Z5J4 1906 aaPredicted RBP6.25□□□□□ -1.41
SMCO1-202ENST00000452776 PI4KAP42356 2102 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 TTC28Q96AY4 2481 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 VCANP13611 3396 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 F8W735 103 aaPredicted RBP6.25□□□□□ -1.41
SMCO1-202ENST00000452776 TMEM178BH3BS89 294 aa6.25□□□□□ -1.41
SMCO1-202ENST00000452776 RPL39P62891 51 aaKnown RBP6.25□□□□□ -1.41
SMCO1-202ENST00000452776 INTS1Q8N201 2190 aaKnown RBP6.25□□□□□ -1.41
SMCO1-202ENST00000452776 BRCA2P51587 3418 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 M0R1W7 72 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 NDUFC1O43677 76 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 RPL35AP18077 110 aaKnown RBP6.24□□□□□ -1.41
SMCO1-202ENST00000452776 LOXP28300 417 aaPredicted RBP6.24□□□□□ -1.41
SMCO1-202ENST00000452776 LINC00315P59091 139 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 KLK9Q2XQG4 91 aa6.24□□□□□ -1.41
SMCO1-202ENST00000452776 BEAN1Q3B7T3 259 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms