RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 JPT2Q9H910 190 aa10.37□□□□□ -0.75
USP39-207ENST00000450066 GSN-AS1Q9NRJ2 163 aa10.37□□□□□ -0.75
USP39-207ENST00000450066 AP5S1Q9NUS5 200 aa10.37□□□□□ -0.75
USP39-207ENST00000450066 LOC389332A0A1B0GUA5 103 aa10.36□□□□□ -0.75
USP39-207ENST00000450066 GATA1P15976 413 aaPredicted RBP10.36□□□□□ -0.75
USP39-207ENST00000450066 PIK3CD-AS1Q5SR53 167 aa10.36□□□□□ -0.75
USP39-207ENST00000450066 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
USP39-207ENST00000450066 MAP1LC3AQ9H492 121 aa10.36□□□□□ -0.75
USP39-207ENST00000450066 M0R2P5 195 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 MGPP08493 103 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 Q6ZWC4 215 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 CSNK1G2-AS1Q8NCQ2 148 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 SPXQ9BT56 116 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 COL6A5A8TX70 2615 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 IGHV3OR16-12A0A075B7B8 117 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 IGHV1-24A0A0C4DH33 117 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 PRSS47A8MTI9 375 aa10.35□□□□□ -0.75
USP39-207ENST00000450066 JOSD1Q15040 202 aaPredicted RBP10.35□□□□□ -0.75
USP39-207ENST00000450066 A0A087WWL8 130 aa10.34□□□□□ -0.75
USP39-207ENST00000450066 AZU1P20160 251 aa10.34□□□□□ -0.75
USP39-207ENST00000450066 CSTL1Q9H114 145 aa10.34□□□□□ -0.75
USP39-207ENST00000450066 PPP1R17O96001 155 aa10.34□□□□□ -0.75
USP39-207ENST00000450066 CRYGDP07320 174 aa10.34□□□□□ -0.75
USP39-207ENST00000450066 NXT2Q9NPJ8 142 aaKnown RBP10.34□□□□□ -0.75
USP39-207ENST00000450066 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
USP39-207ENST00000450066 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
USP39-207ENST00000450066 RASL10AQ92737 203 aa10.33□□□□□ -0.76
USP39-207ENST00000450066 PKD1L1Q8TDX9 2849 aa10.33□□□□□ -0.76
USP39-207ENST00000450066 LINC01546A6NGU7 62 aa10.32□□□□□ -0.76
USP39-207ENST00000450066 ZNF705AQ6ZN79 300 aaPredicted RBP10.32□□□□□ -0.76
USP39-207ENST00000450066 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
USP39-207ENST00000450066 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
USP39-207ENST00000450066 Q8N8P6 123 aa10.32□□□□□ -0.76
USP39-207ENST00000450066 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
USP39-207ENST00000450066 C20orf78Q9BR46 151 aa10.32□□□□□ -0.76
USP39-207ENST00000450066 NDUFAF3Q9BU61 184 aa10.32□□□□□ -0.76
USP39-207ENST00000450066 A8MWV9 139 aa10.31□□□□□ -0.76
USP39-207ENST00000450066 F5H697 171 aa10.31□□□□□ -0.76
USP39-207ENST00000450066 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
USP39-207ENST00000450066 CMYA5Q8N3K9 4069 aa10.31□□□□□ -0.76
USP39-207ENST00000450066 IGLV2-18A0A075B6J9 118 aa10.3□□□□□ -0.76
USP39-207ENST00000450066 RPL39LQ96EH5 51 aaKnown RBP10.3□□□□□ -0.76
USP39-207ENST00000450066 ANK2Q01484 3957 aa10.3□□□□□ -0.76
USP39-207ENST00000450066 SUMO2P61956 95 aaKnown RBP10.3□□□□□ -0.76
USP39-207ENST00000450066 NIT2Q9NQR4 276 aa10.3□□□□□ -0.76
USP39-207ENST00000450066 LEPROTL1O95214 131 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 KRTDAPP60985 99 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 ZNF56Q15929 161 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 KIR2DL5BA0A0G2JN68 375 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 KIR2DL5BA0A0G2JPC4 375 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 SCGB1D1O95968 90 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 UFSP1Q6NVU6 142 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 KIR2DL5AQ8N109 375 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 KIR2DL5BQ8NHK3 375 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 SMIM2Q9BVW6 85 aa10.29□□□□□ -0.76
USP39-207ENST00000450066 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
USP39-207ENST00000450066 A0A096LNJ9 63 aa10.28□□□□□ -0.76
USP39-207ENST00000450066 M0QY20 66 aa10.28□□□□□ -0.76
USP39-207ENST00000450066 C3orf79P0CE67 100 aa10.28□□□□□ -0.76
USP39-207ENST00000450066 DAZ2Q13117 558 aaKnown RBP10.28□□□□□ -0.76
USP39-207ENST00000450066 RRN3P1Q2M238 152 aa10.28□□□□□ -0.76
USP39-207ENST00000450066 OXLD1Q5BKU9 147 aa10.28□□□□□ -0.76
USP39-207ENST00000450066 CFAP126Q5VTH2 177 aa10.28□□□□□ -0.76
USP39-207ENST00000450066 LGALS9BQ3B8N2 356 aa10.27□□□□□ -0.76
USP39-207ENST00000450066 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.76
USP39-207ENST00000450066 HSPB8Q9UJY1 196 aa10.27□□□□□ -0.76
USP39-207ENST00000450066 PLAC8L1A1L4L8 177 aa10.27□□□□□ -0.77
USP39-207ENST00000450066 RHODO00212 210 aa10.27□□□□□ -0.77
USP39-207ENST00000450066 HBDP02042 147 aa10.27□□□□□ -0.77
USP39-207ENST00000450066 APOC4P55056 127 aa10.27□□□□□ -0.77
USP39-207ENST00000450066 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
USP39-207ENST00000450066 EDA2RQ9HAV5 297 aa10.27□□□□□ -0.77
USP39-207ENST00000450066 ST20Q9HBF5 79 aa10.27□□□□□ -0.77
USP39-207ENST00000450066 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
USP39-207ENST00000450066 K7EMI3 77 aa10.26□□□□□ -0.77
USP39-207ENST00000450066 RS1O15537 224 aa10.26□□□□□ -0.77
USP39-207ENST00000450066 BTF3P20290 206 aaKnown RBP10.26□□□□□ -0.77
USP39-207ENST00000450066 TRGV1A0A0A0MS02 117 aa10.26□□□□□ -0.77
USP39-207ENST00000450066 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
USP39-207ENST00000450066 LAGE3Q14657 143 aa10.26□□□□□ -0.77
USP39-207ENST00000450066 H7C1H1 209 aa10.25□□□□□ -0.77
USP39-207ENST00000450066 FCER1GP30273 86 aa10.25□□□□□ -0.77
USP39-207ENST00000450066 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
USP39-207ENST00000450066 LINC00173Q6ZV60 143 aa10.25□□□□□ -0.77
USP39-207ENST00000450066 TMEM70Q9BUB7 260 aa10.25□□□□□ -0.77
USP39-207ENST00000450066 ZMAT5Q9UDW3 170 aaKnown RBP10.25□□□□□ -0.77
USP39-207ENST00000450066 IGHV3-73A0A0B4J1V6 119 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
USP39-207ENST00000450066 Q6ZTI0 123 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 Q8N976 141 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 OVOL2Q9BRP0 275 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 NOP10Q9NPE3 64 aaKnown RBP10.24□□□□□ -0.77
USP39-207ENST00000450066 NBEAL2Q6ZNJ1 2754 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 TCAPO15273 167 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 IGHV4-30-4P0DP06 118 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 KRTAP10-11P60412 298 aa10.24□□□□□ -0.77
USP39-207ENST00000450066 MAP1LC3CQ9BXW4 147 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms