RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 C9orf47Q6ZRZ4 202 aa17.25■□□□□ 0.35
CTDSPL-206ENST00000443503 GTSF1LQ9H1H1 148 aa17.25■□□□□ 0.35
CTDSPL-206ENST00000443503 LINC01545Q5VT33 79 aa17.24■□□□□ 0.35
CTDSPL-206ENST00000443503 PFN2P35080 140 aa17.24■□□□□ 0.35
CTDSPL-206ENST00000443503 TSSC4Q9Y5U2 329 aaPredicted RBP17.24■□□□□ 0.35
CTDSPL-206ENST00000443503 NOP10Q9NPE3 64 aaKnown RBP17.24■□□□□ 0.35
CTDSPL-206ENST00000443503 SPAG8Q99932 426 aaPredicted RBP17.23■□□□□ 0.35
CTDSPL-206ENST00000443503 SUMO4Q6EEV6 95 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 K7EMI3 77 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 CTRLP40313 264 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 OCIAD2Q56VL3 154 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 CCDC140Q96MF4 163 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 FN1P02751 2386 aaKnown RBP17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 GHRHP01286 108 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 CEND1Q8N111 149 aa17.22■□□□□ 0.35
CTDSPL-206ENST00000443503 C2orf70A6NJV1 201 aa17.21■□□□□ 0.35
CTDSPL-206ENST00000443503 K7EMT4 169 aa17.21■□□□□ 0.35
CTDSPL-206ENST00000443503 A0A096LPF7 62 aa17.21■□□□□ 0.35
CTDSPL-206ENST00000443503 RHOHQ15669 191 aa17.21■□□□□ 0.35
CTDSPL-206ENST00000443503 GPHB5Q86YW7 130 aa17.2■□□□□ 0.34
CTDSPL-206ENST00000443503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.2■□□□□ 0.34
CTDSPL-206ENST00000443503 IGKV2-29A2NJV5 120 aaPredicted RBP17.2■□□□□ 0.34
CTDSPL-206ENST00000443503 SIVA1O15304 175 aa17.2■□□□□ 0.34
CTDSPL-206ENST00000443503 AMTNQ6UX39 209 aa17.2■□□□□ 0.34
CTDSPL-206ENST00000443503 Q8N1Y9 231 aa17.2■□□□□ 0.34
CTDSPL-206ENST00000443503 TRBV6-1A0A0K0K1D8 114 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 ZNF80P51504 273 aaPredicted RBP17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 A6NDX4 124 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 SPINK8P0C7L1 97 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 TTTY13Q9BZ97 58 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 GAGE2BQ13066 116 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 GAGE2EQ4V326 116 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 GAGE2DQ9UEU5 116 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 PRRC2AP48634 2157 aaKnown RBP17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 A0A1W2PPM0 123 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 MLST8Q9BVC4 326 aa17.19■□□□□ 0.34
CTDSPL-206ENST00000443503 CRYGBP07316 175 aa17.18■□□□□ 0.34
CTDSPL-206ENST00000443503 PRO1854Q9UHT4 67 aa17.18■□□□□ 0.34
CTDSPL-206ENST00000443503 TAL2Q16559 108 aa17.18■□□□□ 0.34
CTDSPL-206ENST00000443503 FGF6P10767 208 aa17.17■□□□□ 0.34
CTDSPL-206ENST00000443503 K7EP13 123 aa17.17■□□□□ 0.34
CTDSPL-206ENST00000443503 A0A1B0GXF2 115 aa17.17■□□□□ 0.34
CTDSPL-206ENST00000443503 K7EP34 96 aa17.17■□□□□ 0.34
CTDSPL-206ENST00000443503 TRBV20-1A0A075B6N2 111 aa17.16■□□□□ 0.34
CTDSPL-206ENST00000443503 FSTL3O95633 263 aa17.16■□□□□ 0.34
CTDSPL-206ENST00000443503 H3BMG7 143 aa17.16■□□□□ 0.34
CTDSPL-206ENST00000443503 ZFP2Q6ZN57 461 aa17.16■□□□□ 0.34
CTDSPL-206ENST00000443503 GDF5OSQ5U4N7 250 aa17.16■□□□□ 0.34
CTDSPL-206ENST00000443503 C12orf74Q32Q52 190 aa17.15■□□□□ 0.34
CTDSPL-206ENST00000443503 DEFB125Q8N687 156 aa17.15■□□□□ 0.34
CTDSPL-206ENST00000443503 ANAPC13Q9BS18 74 aa17.15■□□□□ 0.34
CTDSPL-206ENST00000443503 NXPH4O95158 308 aa17.15■□□□□ 0.34
CTDSPL-206ENST00000443503 PRORYQ9H606 182 aa17.15■□□□□ 0.34
CTDSPL-206ENST00000443503 LY6LH3BQJ8 138 aa17.14■□□□□ 0.34
CTDSPL-206ENST00000443503 A0A0J9YXV3 536 aa17.14■□□□□ 0.33
CTDSPL-206ENST00000443503 TNFRSF13BO14836 293 aaPredicted RBP17.14■□□□□ 0.33
CTDSPL-206ENST00000443503 APOC4P55056 127 aa17.14■□□□□ 0.33
CTDSPL-206ENST00000443503 RPL39P62891 51 aaKnown RBP17.14■□□□□ 0.33
CTDSPL-206ENST00000443503 HERVK_113P63121 156 aa17.14■□□□□ 0.33
CTDSPL-206ENST00000443503 TMEM61Q8N0U2 210 aa17.14■□□□□ 0.33
CTDSPL-206ENST00000443503 MTORP42345 2549 aa17.13■□□□□ 0.33
CTDSPL-206ENST00000443503 PKD1L2Q7Z442 2459 aa17.13■□□□□ 0.33
CTDSPL-206ENST00000443503 LAMTOR3Q9UHA4 124 aa17.13■□□□□ 0.33
CTDSPL-206ENST00000443503 CLPSL2Q6UWE3 100 aa17.12■□□□□ 0.33
CTDSPL-206ENST00000443503 MBD6Q96DN6 1003 aa17.12■□□□□ 0.33
CTDSPL-206ENST00000443503 LOXL1Q08397 574 aaPredicted RBP17.12■□□□□ 0.33
CTDSPL-206ENST00000443503 UBE2DNLQ8IWF7 75 aa17.11■□□□□ 0.33
CTDSPL-206ENST00000443503 C11orf71Q6IPW1 123 aa17.11■□□□□ 0.33
CTDSPL-206ENST00000443503 SCRT2Q9NQ03 307 aa17.11■□□□□ 0.33
CTDSPL-206ENST00000443503 EBI3Q14213 229 aa17.1■□□□□ 0.33
CTDSPL-206ENST00000443503 ANGP03950 147 aaKnown RBP17.1■□□□□ 0.33
CTDSPL-206ENST00000443503 CCL25O15444 150 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 ZFAND6Q6FIF0 208 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 MDFICQ9P1T7 246 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 A0A0J9YY99 117 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 YPEL4Q96NS1 127 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 EML5Q05BV3 1969 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 A0A0J9YX75 114 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 TMEM89A2RUT3 159 aa17.09■□□□□ 0.33
CTDSPL-206ENST00000443503 F8W1H4 67 aa17.07■□□□□ 0.32
CTDSPL-206ENST00000443503 RNF152Q8N8N0 203 aa17.07■□□□□ 0.32
CTDSPL-206ENST00000443503 IGF1P05019 195 aa17.07■□□□□ 0.32
CTDSPL-206ENST00000443503 SPANXA1Q9NS26 97 aa17.07■□□□□ 0.32
CTDSPL-206ENST00000443503 ATG2AQ2TAZ0 1938 aa17.07■□□□□ 0.32
CTDSPL-206ENST00000443503 CDSNQ15517 529 aa17.07■□□□□ 0.32
CTDSPL-206ENST00000443503 ZNF561-AS1K7EIQ3 104 aa17.06■□□□□ 0.32
CTDSPL-206ENST00000443503 IGHG4P01861 327 aa17.06■□□□□ 0.32
CTDSPL-206ENST00000443503 Q9H8V8 135 aa17.06■□□□□ 0.32
CTDSPL-206ENST00000443503 FASNP49327 2511 aaKnown RBP17.06■□□□□ 0.32
CTDSPL-206ENST00000443503 OVOL2Q9BRP0 275 aa17.06■□□□□ 0.32
CTDSPL-206ENST00000443503 MED14OSP0DP75 135 aa17.05■□□□□ 0.32
CTDSPL-206ENST00000443503 ODF1Q14990 250 aa17.05■□□□□ 0.32
CTDSPL-206ENST00000443503 XCL1P47992 114 aa17.04■□□□□ 0.32
CTDSPL-206ENST00000443503 GAGE2AQ6NT46 116 aa17.04■□□□□ 0.32
CTDSPL-206ENST00000443503 PPDPFLQ8WWR9 84 aa17.04■□□□□ 0.32
CTDSPL-206ENST00000443503 IGLC6P0CF74 106 aa17.03■□□□□ 0.32
CTDSPL-206ENST00000443503 FXYD2P54710 66 aa17.03■□□□□ 0.32
CTDSPL-206ENST00000443503 POLQO75417 2590 aa17.03■□□□□ 0.32
CTDSPL-206ENST00000443503 H3BMM0 161 aa17.03■□□□□ 0.32
CTDSPL-206ENST00000443503 UBE2WQ96B02 151 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms