RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 MGPP08493 103 aa9.81□□□□□ -0.84
HLA-DPA1-243ENST00000437811 SMIM17P0DL12 118 aa9.81□□□□□ -0.84
HLA-DPA1-243ENST00000437811 S100A2P29034 98 aa9.81□□□□□ -0.84
HLA-DPA1-243ENST00000437811 APOC4P55056 127 aa9.81□□□□□ -0.84
HLA-DPA1-243ENST00000437811 LINC00315P59091 139 aa9.81□□□□□ -0.84
HLA-DPA1-243ENST00000437811 VWFP04275 2813 aa9.81□□□□□ -0.84
HLA-DPA1-243ENST00000437811 GAS8-AS1O95177 125 aa9.8□□□□□ -0.84
HLA-DPA1-243ENST00000437811 IGHV4-30-4P0DP06 118 aa9.8□□□□□ -0.84
HLA-DPA1-243ENST00000437811 RRN3P1Q2M238 152 aa9.8□□□□□ -0.84
HLA-DPA1-243ENST00000437811 C16orf74Q96GX8 76 aa9.8□□□□□ -0.84
HLA-DPA1-243ENST00000437811 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
HLA-DPA1-243ENST00000437811 A0A087WWL8 130 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 CRYGDP07320 174 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 GATA1P15976 413 aaPredicted RBP9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 SAMD5Q5TGI4 173 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NIT1Q86X76 327 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NRACQ8N912 160 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 HIST1H2BLQ99880 126 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NDUFAF3Q9BU61 184 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 SAMD10Q9BYL1 202 aa9.79□□□□□ -0.84
HLA-DPA1-243ENST00000437811 A8MWV9 139 aa9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 G3V4G9 280 aa9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 FABP4P15090 132 aa9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 AKR1D1P51857 326 aa9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 MRPL16Q9NX20 251 aaKnown RBP9.78□□□□□ -0.84
HLA-DPA1-243ENST00000437811 PLAC8L1A1L4L8 177 aa9.77□□□□□ -0.84
HLA-DPA1-243ENST00000437811 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.84
HLA-DPA1-243ENST00000437811 SUMO4Q6EEV6 95 aa9.77□□□□□ -0.84
HLA-DPA1-243ENST00000437811 RASL10AQ92737 203 aa9.77□□□□□ -0.84
HLA-DPA1-243ENST00000437811 NOTCH3Q9UM47 2321 aa9.77□□□□□ -0.84
HLA-DPA1-243ENST00000437811 A8MZ25 164 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 HSBP1O75506 76 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 LINC00614P0C842 121 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 LURAP1LQ8IV03 231 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 X6R8D5 127 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 STAB1Q9NY15 2570 aa9.76□□□□□ -0.85
HLA-DPA1-243ENST00000437811 TRGV1A0A0A0MS02 117 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 LOC389332A0A1B0GUA5 103 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 PRSS47A8MTI9 375 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 F5H697 171 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 RS1O15537 224 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 PMCHP20382 165 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 IFI27P40305 119 aaPredicted RBP9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 ZNF56Q15929 161 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 LGALS9BQ3B8N2 356 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 UFSP1Q6NVU6 142 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 PACRGQ96M98 296 aaPredicted RBP9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 OVOL2Q9BRP0 275 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 RHODO00212 210 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 PPP1R17O96001 155 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 AMTP48728 403 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 DEFB135Q30KP9 77 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 CFAP126Q5VTH2 177 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 OR10D4PQ8NGN7 298 aa9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 NXT2Q9NPJ8 142 aaKnown RBP9.75□□□□□ -0.85
HLA-DPA1-243ENST00000437811 Q6ZTI0 123 aa9.74□□□□□ -0.85
HLA-DPA1-243ENST00000437811 FAM19A2Q8N3H0 131 aa9.74□□□□□ -0.85
HLA-DPA1-243ENST00000437811 C20orf78Q9BR46 151 aa9.74□□□□□ -0.85
HLA-DPA1-243ENST00000437811 EDA2RQ9HAV5 297 aa9.74□□□□□ -0.85
HLA-DPA1-243ENST00000437811 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
HLA-DPA1-243ENST00000437811 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
HLA-DPA1-243ENST00000437811 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 LINC01546A6NGU7 62 aa9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 M0QY20 66 aa9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 SUMO2P61956 95 aaKnown RBP9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 Q6ZWC4 215 aa9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 Q8N8P6 123 aa9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 SMIM2Q9BVW6 85 aa9.73□□□□□ -0.85
HLA-DPA1-243ENST00000437811 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
HLA-DPA1-243ENST00000437811 ZFP2Q6ZN57 461 aa9.72□□□□□ -0.85
HLA-DPA1-243ENST00000437811 RNF183Q96D59 192 aa9.72□□□□□ -0.85
HLA-DPA1-243ENST00000437811 COL6A5A8TX70 2615 aa9.71□□□□□ -0.85
HLA-DPA1-243ENST00000437811 NACAE9PAV3 2078 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 IGHV3-73A0A0B4J1V6 119 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 TRAV4A0A0B4J268 109 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 H7C1H1 209 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 OR4C5Q8NGB2 326 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 OR11H2Q8NH07 326 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 ST20Q9HBF5 79 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 TRRAPQ9Y4A5 3859 aa9.71□□□□□ -0.86
HLA-DPA1-243ENST00000437811 PMCHL1Q16048 86 aa9.7□□□□□ -0.86
HLA-DPA1-243ENST00000437811 LINC00612Q8N6U2 182 aa9.7□□□□□ -0.86
HLA-DPA1-243ENST00000437811 CMYA5Q8N3K9 4069 aa9.69□□□□□ -0.86
HLA-DPA1-243ENST00000437811 GAGE12BA1L429 117 aa9.69□□□□□ -0.86
HLA-DPA1-243ENST00000437811 GAGE7O76087 117 aa9.69□□□□□ -0.86
HLA-DPA1-243ENST00000437811 IGHV3-53P01767 116 aa9.69□□□□□ -0.86
HLA-DPA1-243ENST00000437811 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms