RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IGHV4-4A0A075B6R2 117 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 NPSP0C0P6 89 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 PRELID3AQ96N28 172 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 A0A096LNJ9 63 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 LOC389332A0A1B0GUA5 103 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 LINC01545Q5VT33 79 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 SPATA3Q8NHX4 192 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 SCRT2Q9NQ03 307 aa15.55■□□□□ 0.08
PTPRF-207ENST00000436724 H0Y8G0 127 aa15.54■□□□□ 0.08
PTPRF-207ENST00000436724 CACNG7P62955 275 aa15.54■□□□□ 0.08
PTPRF-207ENST00000436724 ORMDL3Q8N138 153 aa15.54■□□□□ 0.08
PTPRF-207ENST00000436724 LINC00482Q8N8I6 264 aa15.54■□□□□ 0.08
PTPRF-207ENST00000436724 CKS2P33552 79 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 Q8N1Y9 231 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 PMCHL2Q9BQD1 86 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 GOLT1BQ9Y3E0 138 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 NOTCH3Q9UM47 2321 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 OR11H12B2RN74 326 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 MDFICQ9P1T7 246 aa15.53■□□□□ 0.08
PTPRF-207ENST00000436724 IGHV1OR15-1A0A075B7D0 117 aa15.52■□□□□ 0.08
PTPRF-207ENST00000436724 PRM2P04554 102 aa15.51■□□□□ 0.07
PTPRF-207ENST00000436724 MED14OSP0DP75 135 aa15.51■□□□□ 0.07
PTPRF-207ENST00000436724 HTN1P15515 57 aa15.51■□□□□ 0.07
PTPRF-207ENST00000436724 WFDC10AQ9H1F0 79 aa15.51■□□□□ 0.07
PTPRF-207ENST00000436724 NPYP01303 97 aa15.51■□□□□ 0.07
PTPRF-207ENST00000436724 GATA1P15976 413 aaPredicted RBP15.51■□□□□ 0.07
PTPRF-207ENST00000436724 TRAV26-2A0A0B4J265 109 aa15.5■□□□□ 0.07
PTPRF-207ENST00000436724 IGHV3-16A0A0C4DH30 117 aa15.5■□□□□ 0.07
PTPRF-207ENST00000436724 SMIM15Q7Z3B0 74 aa15.5■□□□□ 0.07
PTPRF-207ENST00000436724 TRRAPQ9Y4A5 3859 aa15.49■□□□□ 0.07
PTPRF-207ENST00000436724 HSBP1L1C9JCN9 74 aa15.49■□□□□ 0.07
PTPRF-207ENST00000436724 STHQ8IWL8 128 aa15.49■□□□□ 0.07
PTPRF-207ENST00000436724 CITED1Q99966 193 aa15.49■□□□□ 0.07
PTPRF-207ENST00000436724 C14orf178Q8N769 122 aaPredicted RBP15.49■□□□□ 0.07
PTPRF-207ENST00000436724 SLC25A34Q6PIV7 304 aa15.48■□□□□ 0.07
PTPRF-207ENST00000436724 Q6ZVH6 145 aa15.48■□□□□ 0.07
PTPRF-207ENST00000436724 JPT2Q9H910 190 aa15.47■□□□□ 0.07
PTPRF-207ENST00000436724 CBY3A6NI87 242 aa15.46■□□□□ 0.07
PTPRF-207ENST00000436724 BEAN1Q3B7T3 259 aa15.46■□□□□ 0.07
PTPRF-207ENST00000436724 C9orf85Q96MD7 179 aa15.46■□□□□ 0.07
PTPRF-207ENST00000436724 XCL2Q9UBD3 114 aa15.46■□□□□ 0.07
PTPRF-207ENST00000436724 TRPT1Q86TN4 253 aaKnown RBP15.46■□□□□ 0.07
PTPRF-207ENST00000436724 C19orf73Q9NVV2 129 aa15.46■□□□□ 0.07
PTPRF-207ENST00000436724 FBN1P35555 2871 aaKnown RBP15.46■□□□□ 0.07
PTPRF-207ENST00000436724 NXPH4O95158 308 aa15.45■□□□□ 0.06
PTPRF-207ENST00000436724 MPV17L2Q567V2 206 aa15.45■□□□□ 0.06
PTPRF-207ENST00000436724 ORAOV1Q8WV07 137 aa15.45■□□□□ 0.06
PTPRF-207ENST00000436724 PPBPP02775 128 aa15.45■□□□□ 0.06
PTPRF-207ENST00000436724 OR2K2Q8NGT1 345 aa15.45■□□□□ 0.06
PTPRF-207ENST00000436724 TNFRSF6BO95407 300 aa15.44■□□□□ 0.06
PTPRF-207ENST00000436724 AP1S3Q96PC3 154 aa15.43■□□□□ 0.06
PTPRF-207ENST00000436724 DPH3P1Q9H4G8 78 aa15.43■□□□□ 0.06
PTPRF-207ENST00000436724 HBDP02042 147 aa15.43■□□□□ 0.06
PTPRF-207ENST00000436724 CLUHP3Q96NS8 147 aa15.43■□□□□ 0.06
PTPRF-207ENST00000436724 COX11Q9Y6N1 276 aa15.43■□□□□ 0.06
PTPRF-207ENST00000436724 NUDT3O95989 172 aa15.42■□□□□ 0.06
PTPRF-207ENST00000436724 INSP01308 110 aa15.42■□□□□ 0.06
PTPRF-207ENST00000436724 MGPP08493 103 aa15.42■□□□□ 0.06
PTPRF-207ENST00000436724 LINC01587Q99440 93 aa15.42■□□□□ 0.06
PTPRF-207ENST00000436724 TRGV11A0A075B6L2 103 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 A0A087WWL8 130 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 COX8AP10176 69 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 LGALS9BQ3B8N2 356 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 KRTAP24-1Q3LI83 254 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 LGALS9CQ6DKI2 356 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 NRACQ8N912 160 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 LINC01546A6NGU7 62 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 BVES-AS1Q5T3Y7 98 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 KIF25-AS1Q9Y6Z4 181 aa15.41■□□□□ 0.06
PTPRF-207ENST00000436724 IGHV3OR16-12A0A075B7B8 117 aa15.39■□□□□ 0.05
PTPRF-207ENST00000436724 CMC4P56277 68 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-207ENST00000436724 LINC00315P59091 139 aa15.39■□□□□ 0.05
PTPRF-207ENST00000436724 IFI27L1Q96BM0 104 aa15.39■□□□□ 0.05
PTPRF-207ENST00000436724 FAM110AQ9BQ89 295 aa15.39■□□□□ 0.05
PTPRF-207ENST00000436724 MAP1LC3AQ9H492 121 aa15.39■□□□□ 0.05
PTPRF-207ENST00000436724 RPL35AP18077 110 aaKnown RBP15.39■□□□□ 0.05
PTPRF-207ENST00000436724 ANKRD39Q53RE8 183 aa15.39■□□□□ 0.05
PTPRF-207ENST00000436724 ZNF876PQ49A33 203 aa15.38■□□□□ 0.05
PTPRF-207ENST00000436724 C1orf158Q8N1D5 194 aa15.38■□□□□ 0.05
PTPRF-207ENST00000436724 FAM74A4Q5TZK3 123 aa15.38■□□□□ 0.05
PTPRF-207ENST00000436724 C2orf91Q6ZV80 131 aa15.38■□□□□ 0.05
PTPRF-207ENST00000436724 RPL39LQ96EH5 51 aaKnown RBP15.38■□□□□ 0.05
PTPRF-207ENST00000436724 MRAP2Q96G30 205 aa15.38■□□□□ 0.05
PTPRF-207ENST00000436724 CCL25O15444 150 aa15.37■□□□□ 0.05
PTPRF-207ENST00000436724 GIG44P09565 113 aaPredicted RBP15.37■□□□□ 0.05
PTPRF-207ENST00000436724 DEFB125Q8N687 156 aa15.37■□□□□ 0.05
PTPRF-207ENST00000436724 MAST4O15021 2626 aa15.37■□□□□ 0.05
PTPRF-207ENST00000436724 SMIM17P0DL12 118 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 RASL10AQ92737 203 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 FGF6P10767 208 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 AZU1P20160 251 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 C9orf66Q5T8R8 295 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 C12orf54Q6X4T0 127 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 SYT8Q8NBV8 401 aa15.36■□□□□ 0.05
PTPRF-207ENST00000436724 TAX1BP3O14907 124 aa15.35■□□□□ 0.05
PTPRF-207ENST00000436724 STAB1Q9NY15 2570 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 FCER1GP30273 86 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 INSL3P51460 131 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 C11orf72Q8NBR9 251 aa15.34■□□□□ 0.05
PTPRF-207ENST00000436724 NXT2Q9NPJ8 142 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms