RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 TENM1Q9UKZ4 2725 aa13.83□□□□□ -0.2
FAM3A-212ENST00000434658 LGALS9O00182 355 aa13.83□□□□□ -0.2
FAM3A-212ENST00000434658 SPRY2O43597 315 aa13.83□□□□□ -0.2
FAM3A-212ENST00000434658 C14orf178Q8N769 122 aaPredicted RBP13.83□□□□□ -0.2
FAM3A-212ENST00000434658 POM121L12Q8N7R1 296 aa13.83□□□□□ -0.2
FAM3A-212ENST00000434658 K7EMI3 77 aa13.82□□□□□ -0.2
FAM3A-212ENST00000434658 IGKCP01834 107 aa13.82□□□□□ -0.2
FAM3A-212ENST00000434658 SUMO2P61956 95 aaKnown RBP13.82□□□□□ -0.2
FAM3A-212ENST00000434658 HHLA3Q9XRX5 114 aa13.82□□□□□ -0.2
FAM3A-212ENST00000434658 TMEM97Q5BJF2 176 aa13.81□□□□□ -0.2
FAM3A-212ENST00000434658 CITED1Q99966 193 aa13.81□□□□□ -0.2
FAM3A-212ENST00000434658 ANK2Q01484 3957 aa13.81□□□□□ -0.2
FAM3A-212ENST00000434658 K7EQG2 157 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 DPM2O94777 84 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 UBE2V1Q13404 147 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 ORMDL2Q53FV1 153 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 FAM159AQ6UWV7 190 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 RNF152Q8N8N0 203 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 MUC4Q99102 2169 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 C7orf71A4D174 169 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 PPP1R17O96001 155 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 SNRPD3P62318 126 aaKnown RBP13.8□□□□□ -0.2
FAM3A-212ENST00000434658 SEC11AP67812 179 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 UBE2E2Q96LR5 201 aa13.8□□□□□ -0.2
FAM3A-212ENST00000434658 A0A0J9YX75 114 aa13.79□□□□□ -0.2
FAM3A-212ENST00000434658 MGPP08493 103 aa13.79□□□□□ -0.2
FAM3A-212ENST00000434658 ZNF688P0C7X2 276 aa13.79□□□□□ -0.2
FAM3A-212ENST00000434658 NMUP48645 174 aa13.79□□□□□ -0.2
FAM3A-212ENST00000434658 C11orf44Q8N8P7 122 aa13.79□□□□□ -0.2
FAM3A-212ENST00000434658 IGHV4OR15-8A0A075B7B6 117 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 A0A087WW49 117 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 SYNJ2BPP57105 145 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 TCTAP57738 103 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 PCP2Q8IVA1 136 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
FAM3A-212ENST00000434658 KIF25-AS1Q9Y6Z4 181 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 CCL25O15444 150 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 PTTG1IPP53801 180 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 HSD52Q0P140 79 aa13.78□□□□□ -0.2
FAM3A-212ENST00000434658 A0A087WX48 190 aa13.77□□□□□ -0.21
FAM3A-212ENST00000434658 LINC00315P59091 139 aa13.77□□□□□ -0.21
FAM3A-212ENST00000434658 HIST2H2BDQ6DRA6 164 aa13.77□□□□□ -0.21
FAM3A-212ENST00000434658 ADAMTSL5Q6ZMM2 481 aa13.77□□□□□ -0.21
FAM3A-212ENST00000434658 TOMM6Q96B49 74 aa13.77□□□□□ -0.21
FAM3A-212ENST00000434658 TRAV12-1A0A0B4J245 112 aa13.76□□□□□ -0.21
FAM3A-212ENST00000434658 TRAV12-3A0A0B4J271 114 aa13.76□□□□□ -0.21
FAM3A-212ENST00000434658 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.76□□□□□ -0.21
FAM3A-212ENST00000434658 CD28P10747 220 aa13.76□□□□□ -0.21
FAM3A-212ENST00000434658 HOXD3P31249 432 aaPredicted RBP13.76□□□□□ -0.21
FAM3A-212ENST00000434658 MRPL35Q9NZE8 188 aaKnown RBP13.76□□□□□ -0.21
FAM3A-212ENST00000434658 IGKV2D-26A0A0A0MRZ7 120 aa13.76□□□□□ -0.21
FAM3A-212ENST00000434658 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
FAM3A-212ENST00000434658 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
FAM3A-212ENST00000434658 CD7P09564 240 aa13.75□□□□□ -0.21
FAM3A-212ENST00000434658 RPL32P62910 135 aaKnown RBP13.75□□□□□ -0.21
FAM3A-212ENST00000434658 CBY3A6NI87 242 aa13.74□□□□□ -0.21
FAM3A-212ENST00000434658 ZC2HC1BQ5TFG8 222 aa13.74□□□□□ -0.21
FAM3A-212ENST00000434658 DUSP14O95147 198 aaKnown RBP13.74□□□□□ -0.21
FAM3A-212ENST00000434658 PLNP26678 52 aa13.74□□□□□ -0.21
FAM3A-212ENST00000434658 VAMP3Q15836 100 aa13.74□□□□□ -0.21
FAM3A-212ENST00000434658 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
FAM3A-212ENST00000434658 HIGD1BQ9P298 99 aa13.74□□□□□ -0.21
FAM3A-212ENST00000434658 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
FAM3A-212ENST00000434658 SCGB3A1Q96QR1 104 aa13.73□□□□□ -0.21
FAM3A-212ENST00000434658 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
FAM3A-212ENST00000434658 A6NDN8 102 aa13.72□□□□□ -0.21
FAM3A-212ENST00000434658 H7C1H1 209 aa13.72□□□□□ -0.21
FAM3A-212ENST00000434658 CDKN1BP46527 198 aa13.72□□□□□ -0.21
FAM3A-212ENST00000434658 KHDC1LQ5JSQ8 128 aa13.72□□□□□ -0.21
FAM3A-212ENST00000434658 GTSCR1Q86UQ5 136 aa13.72□□□□□ -0.21
FAM3A-212ENST00000434658 CSTL1Q9H114 145 aa13.72□□□□□ -0.21
FAM3A-212ENST00000434658 TCTEX1D4Q5JR98 221 aa13.71□□□□□ -0.21
FAM3A-212ENST00000434658 FOXI2Q6ZQN5 318 aa13.71□□□□□ -0.21
FAM3A-212ENST00000434658 F8VRH5 84 aa13.71□□□□□ -0.22
FAM3A-212ENST00000434658 SUMO4Q6EEV6 95 aa13.71□□□□□ -0.22
FAM3A-212ENST00000434658 C2orf66Q6UXQ4 117 aa13.71□□□□□ -0.22
FAM3A-212ENST00000434658 TRAV12-2A0A075B6T6 113 aa13.7□□□□□ -0.22
FAM3A-212ENST00000434658 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
FAM3A-212ENST00000434658 NEXN-AS1Q8NBZ9 246 aa13.7□□□□□ -0.22
FAM3A-212ENST00000434658 JPT2Q9H910 190 aa13.7□□□□□ -0.22
FAM3A-212ENST00000434658 IGHV1OR15-1A0A075B7D0 117 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 NSUN5P1Q3KNT7 163 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 AMTNQ6UX39 209 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 ERASQ7Z444 233 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 H3BRM9 83 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 POLR2KP53803 58 aaKnown RBP13.69□□□□□ -0.22
FAM3A-212ENST00000434658 SPINK13Q1W4C9 94 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 NDUFA11Q86Y39 141 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
FAM3A-212ENST00000434658 A0A1W2PRX2 142 aa13.68□□□□□ -0.22
FAM3A-212ENST00000434658 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
FAM3A-212ENST00000434658 Q8N1Y9 231 aa13.68□□□□□ -0.22
FAM3A-212ENST00000434658 TTTY13Q9BZ97 58 aa13.68□□□□□ -0.22
FAM3A-212ENST00000434658 MDFICQ9P1T7 246 aa13.68□□□□□ -0.22
FAM3A-212ENST00000434658 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
FAM3A-212ENST00000434658 AGRNO00468 2067 aa13.68□□□□□ -0.22
FAM3A-212ENST00000434658 A0A087WWL8 130 aa13.67□□□□□ -0.22
FAM3A-212ENST00000434658 SLURP1P55000 103 aa13.67□□□□□ -0.22
FAM3A-212ENST00000434658 BAALCQ8WXS3 180 aa13.67□□□□□ -0.22
FAM3A-212ENST00000434658 TSSC4Q9Y5U2 329 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms