RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 A6NIN4 97 aa0.71□□□□□ -2.3
PTPN4-205ENST00000433888 CYP2G1PQ6ZSU1 146 aa0.71□□□□□ -2.3
PTPN4-205ENST00000433888 C20orf197Q8N268 126 aa0.71□□□□□ -2.3
PTPN4-205ENST00000433888 FBN2P35556 2912 aa0.71□□□□□ -2.3
PTPN4-205ENST00000433888 RBBP6Q7Z6E9 1792 aaKnown RBP0.7□□□□□ -2.3
PTPN4-205ENST00000433888 AKAP11Q9UKA4 1901 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 TRAV12-2A0A075B6T6 113 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 DLEU1O43261 78 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 SNAPC5O75971 98 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 APOC1P02654 83 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 PRB3Q04118 309 aaPredicted RBP0.7□□□□□ -2.3
PTPN4-205ENST00000433888 C9orf116Q5BN46 136 aaPredicted RBP0.7□□□□□ -2.3
PTPN4-205ENST00000433888 SPANXN1Q5VSR9 72 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 SLC48A1Q6P1K1 146 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 LINC00575Q6W349 94 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 Q6ZS92 163 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 AGPAT4-IT1Q9H0P7 198 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 ADGRB1O14514 1584 aa0.7□□□□□ -2.3
PTPN4-205ENST00000433888 NOTCH1P46531 2555 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 UHRF1BP1LA0JNW5 1464 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 NDUFB6O95139 128 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 PIPP12273 146 aaPredicted RBP0.69□□□□□ -2.3
PTPN4-205ENST00000433888 ELOF1P60002 83 aaKnown RBP0.69□□□□□ -2.3
PTPN4-205ENST00000433888 INSL4Q14641 139 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 C6orf52Q5T4I8 152 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.69□□□□□ -2.3
PTPN4-205ENST00000433888 RPRMQ9NS64 109 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 CCDC167Q9P0B6 97 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
PTPN4-205ENST00000433888 GRIN2AQ12879 1464 aa0.68□□□□□ -2.3
PTPN4-205ENST00000433888 EFCAB10A6NFE3 127 aa0.68□□□□□ -2.3
PTPN4-205ENST00000433888 SCIMPQ6UWF3 145 aa0.68□□□□□ -2.3
PTPN4-205ENST00000433888 SCN3BQ9NY72 215 aa0.68□□□□□ -2.3
PTPN4-205ENST00000433888 MBD5Q9P267 1494 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 MEGF8Q7Z7M0 2845 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 PHIPQ8WWQ0 1821 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 TRAV2A0A0B4J234 112 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 FAM92AA1XBS5 289 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 MIF4GDA9UHW6 222 aaKnown RBP0.67□□□□□ -2.3
PTPN4-205ENST00000433888 AKAIN1P0CW23 69 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 S100A1P23297 94 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 DEFB132Q7Z7B7 95 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 C4orf33Q8N1A6 199 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 ZDBF2Q9HCK1 2354 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 NRXN2Q9P2S2 1712 aa0.67□□□□□ -2.3
PTPN4-205ENST00000433888 PARP14Q460N5 1801 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 MYOM3Q5VTT5 1437 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 MCRIP1C9JLW8 97 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 CBLN1P23435 193 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 ZNF137PP52743 207 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 CATR1Q13166 79 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 COX7B2Q8TF08 81 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 TMEM14BQ9NUH8 114 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 GNG8Q9UK08 70 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 LINC00312Q9Y6C7 94 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 ARAP2Q8WZ64 1704 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 ABCA4P78363 2273 aa0.66□□□□□ -2.3
PTPN4-205ENST00000433888 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.3
PTPN4-205ENST00000433888 A0A087WTM6 91 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 TEX49A0A1B0GTD5 131 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 F6UZH7 168 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 K7EIL1 84 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 CCL3L1P16619 93 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 SSBP1Q04837 148 aaKnown RBP0.65□□□□□ -2.31
PTPN4-205ENST00000433888 KLKP1Q107X0 134 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 Q8N8P6 123 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 TSLPQ969D9 159 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 DSCR8Q96T75 97 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 RERGLQ9H628 205 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 COA4Q9NYJ1 87 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 BET1LQ9NYM9 111 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 TMEM2Q9UHN6 1383 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 DOCK1Q14185 1865 aa0.65□□□□□ -2.31
PTPN4-205ENST00000433888 A0A0D9SG42 100 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 CLPSL1A2RUU4 121 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 OOSP1A8MZH6 123 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 HCG22E2RYF7 251 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 APODP05090 189 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 UBE2D1P51668 147 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 PP6455Q8WZ26 134 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 Q96NJ1 140 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 C2orf88Q9BSF0 95 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 SNRNP25Q9BV90 132 aaKnown RBP0.64□□□□□ -2.31
PTPN4-205ENST00000433888 V9GYV3 84 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 ABCA1O95477 2261 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
PTPN4-205ENST00000433888 MYH8P13535 1937 aa0.64□□□□□ -2.31
PTPN4-205ENST00000433888 BLMP54132 1417 aaPredicted RBP0.64□□□□□ -2.31
PTPN4-205ENST00000433888 PLXNA1Q9UIW2 1896 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 ZNF142P52746 1687 aaPredicted RBP0.63□□□□□ -2.31
PTPN4-205ENST00000433888 TRGV1A0A0A0MS02 117 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 TRBV7-1A0A0A6YYK4 115 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 Q56UQ5 140 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 SPINK9Q5DT21 86 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 MRPL54Q6P161 138 aaKnown RBP0.63□□□□□ -2.31
PTPN4-205ENST00000433888 C1orf54Q8WWF1 131 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 NAA60Q9H7X0 242 aa0.63□□□□□ -2.31
PTPN4-205ENST00000433888 LAMB1P07942 1786 aa0.62□□□□□ -2.31
PTPN4-205ENST00000433888 MED13LQ71F56 2210 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms