RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 K7EQM0 130 aa9.72□□□□□ -0.85
NUP50-209ENST00000432340 GCGP01275 180 aa9.72□□□□□ -0.85
NUP50-209ENST00000432340 CTF1Q16619 201 aa9.72□□□□□ -0.85
NUP50-209ENST00000432340 KHDC3LQ587J8 217 aa9.72□□□□□ -0.85
NUP50-209ENST00000432340 CLPSL2Q6UWE3 100 aa9.72□□□□□ -0.85
NUP50-209ENST00000432340 TVP23CQ96ET8 276 aa9.72□□□□□ -0.85
NUP50-209ENST00000432340 FAM24AA6NFZ4 105 aa9.71□□□□□ -0.86
NUP50-209ENST00000432340 SLPIP03973 132 aa9.71□□□□□ -0.86
NUP50-209ENST00000432340 LSM5Q9Y4Y9 91 aaKnown RBP9.71□□□□□ -0.86
NUP50-209ENST00000432340 RBX1P62877 108 aa9.7□□□□□ -0.86
NUP50-209ENST00000432340 REG3AQ06141 175 aa9.7□□□□□ -0.86
NUP50-209ENST00000432340 SMUG1Q53HV7 270 aa9.7□□□□□ -0.86
NUP50-209ENST00000432340 OR10G8Q8NGN5 311 aa9.7□□□□□ -0.86
NUP50-209ENST00000432340 IL36BQ9NZH7 164 aa9.7□□□□□ -0.86
NUP50-209ENST00000432340 C11orf21Q9P2W6 132 aa9.7□□□□□ -0.86
NUP50-209ENST00000432340 OR11H4Q8NGC9 324 aa9.69□□□□□ -0.86
NUP50-209ENST00000432340 PRSS3P2Q8NHM4 247 aa9.69□□□□□ -0.86
NUP50-209ENST00000432340 C17orf112F2Z3M2 114 aa9.68□□□□□ -0.86
NUP50-209ENST00000432340 TMEM252Q8N6L7 170 aa9.68□□□□□ -0.86
NUP50-209ENST00000432340 TRIM63Q969Q1 353 aa9.68□□□□□ -0.86
NUP50-209ENST00000432340 JPT2Q9H910 190 aa9.68□□□□□ -0.86
NUP50-209ENST00000432340 MBD2Q9UBB5 411 aa9.68□□□□□ -0.86
NUP50-209ENST00000432340 FSIP2Q5CZC0 6907 aa9.68□□□□□ -0.86
NUP50-209ENST00000432340 MITD1Q8WV92 249 aa9.67□□□□□ -0.86
NUP50-209ENST00000432340 IGLV1-50A0A075B6I6 118 aa9.66□□□□□ -0.86
NUP50-209ENST00000432340 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
NUP50-209ENST00000432340 ZNF80P51504 273 aaPredicted RBP9.66□□□□□ -0.86
NUP50-209ENST00000432340 SAPCD1Q5SSQ6 148 aa9.66□□□□□ -0.86
NUP50-209ENST00000432340 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
NUP50-209ENST00000432340 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
NUP50-209ENST00000432340 DIRC1Q969H9 104 aa9.66□□□□□ -0.86
NUP50-209ENST00000432340 TRBV25-1A0A075B6N4 114 aa9.65□□□□□ -0.86
NUP50-209ENST00000432340 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
NUP50-209ENST00000432340 PYDC2Q56P42 97 aa9.65□□□□□ -0.86
NUP50-209ENST00000432340 THAP6Q8TBB0 222 aa9.65□□□□□ -0.86
NUP50-209ENST00000432340 SFRP2Q96HF1 295 aa9.65□□□□□ -0.86
NUP50-209ENST00000432340 NAA50Q9GZZ1 169 aaKnown RBP9.65□□□□□ -0.86
NUP50-209ENST00000432340 RAB2AP61019 212 aa9.64□□□□□ -0.87
NUP50-209ENST00000432340 GAGE6Q13070 117 aa9.64□□□□□ -0.87
NUP50-209ENST00000432340 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
NUP50-209ENST00000432340 IGSF23A1L1A6 192 aa9.63□□□□□ -0.87
NUP50-209ENST00000432340 FAM25EA8MYX2 175 aa9.63□□□□□ -0.87
NUP50-209ENST00000432340 NDUFB6O95139 128 aa9.63□□□□□ -0.87
NUP50-209ENST00000432340 PQLC2Q6ZP29 291 aa9.63□□□□□ -0.87
NUP50-209ENST00000432340 PSG8Q9UQ74 426 aa9.63□□□□□ -0.87
NUP50-209ENST00000432340 A0A096LNI7 61 aa9.62□□□□□ -0.87
NUP50-209ENST00000432340 NAP1L6A6NFF2 107 aa9.62□□□□□ -0.87
NUP50-209ENST00000432340 H3BVH4 76 aa9.62□□□□□ -0.87
NUP50-209ENST00000432340 MT-ND6P03923 174 aa9.62□□□□□ -0.87
NUP50-209ENST00000432340 RPL13AP40429 203 aaKnown RBP9.62□□□□□ -0.87
NUP50-209ENST00000432340 RAB4BP61018 213 aa9.62□□□□□ -0.87
NUP50-209ENST00000432340 C5orf17Q8NAS9 161 aa9.62□□□□□ -0.87
NUP50-209ENST00000432340 IGKV3D-20A0A0C4DH25 116 aa9.61□□□□□ -0.87
NUP50-209ENST00000432340 FABP5P3A8MUU1 101 aa9.61□□□□□ -0.87
NUP50-209ENST00000432340 TPT1P13693 172 aaKnown RBP9.61□□□□□ -0.87
NUP50-209ENST00000432340 GNG5P63218 68 aa9.61□□□□□ -0.87
NUP50-209ENST00000432340 FLI1Q01543 452 aaPredicted RBP9.61□□□□□ -0.87
NUP50-209ENST00000432340 ZFP82Q8N141 532 aa9.61□□□□□ -0.87
NUP50-209ENST00000432340 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
NUP50-209ENST00000432340 C11orf1Q9H5F2 150 aa9.61□□□□□ -0.87
NUP50-209ENST00000432340 B4DEV8 164 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 TCRAP04437 139 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 ARMS2P0C7Q2 107 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 UBE2D1P51668 147 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 INO80EQ8NBZ0 244 aaPredicted RBP9.6□□□□□ -0.87
NUP50-209ENST00000432340 OR5C1Q8NGR4 320 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 DERL1Q9BUN8 251 aa9.6□□□□□ -0.87
NUP50-209ENST00000432340 M0R381 172 aa9.59□□□□□ -0.87
NUP50-209ENST00000432340 SULT1A2P50226 295 aa9.59□□□□□ -0.87
NUP50-209ENST00000432340 RAB5CP51148 216 aa9.59□□□□□ -0.87
NUP50-209ENST00000432340 CNPY1Q3B7I2 92 aa9.59□□□□□ -0.87
NUP50-209ENST00000432340 PRNTQ86SH4 94 aa9.59□□□□□ -0.87
NUP50-209ENST00000432340 NEXN-AS1Q8NBZ9 246 aa9.59□□□□□ -0.87
NUP50-209ENST00000432340 WDR61Q9GZS3 305 aaKnown RBP9.59□□□□□ -0.87
NUP50-209ENST00000432340 IGHV1-24A0A0C4DH33 117 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 TRBV6-1A0A0K0K1D8 114 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 ZNF56Q15929 161 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 IQCJQ1A5X6 159 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 C15orf56Q8N910 161 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 FLVCR2Q9UPI3 526 aa9.58□□□□□ -0.88
NUP50-209ENST00000432340 SPCS2Q15005 226 aa9.57□□□□□ -0.88
NUP50-209ENST00000432340 HIGD2BQ4VC39 106 aa9.57□□□□□ -0.88
NUP50-209ENST00000432340 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
NUP50-209ENST00000432340 A0A1W2PPV4 95 aa9.56□□□□□ -0.88
NUP50-209ENST00000432340 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
NUP50-209ENST00000432340 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
NUP50-209ENST00000432340 AQP10Q96PS8 301 aa9.56□□□□□ -0.88
NUP50-209ENST00000432340 CENPXA8MT69 81 aa9.55□□□□□ -0.88
NUP50-209ENST00000432340 PRR27Q6MZM9 219 aa9.55□□□□□ -0.88
NUP50-209ENST00000432340 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
NUP50-209ENST00000432340 SUN5Q8TC36 379 aa9.55□□□□□ -0.88
NUP50-209ENST00000432340 GAGE12HA6NDE8 117 aa9.54□□□□□ -0.88
NUP50-209ENST00000432340 H3BMQ9 156 aa9.54□□□□□ -0.88
NUP50-209ENST00000432340 LINC01547P58512 204 aaPredicted RBP9.54□□□□□ -0.88
NUP50-209ENST00000432340 NHLH2Q02577 135 aa9.53□□□□□ -0.88
NUP50-209ENST00000432340 RAB32Q13637 225 aa9.53□□□□□ -0.88
NUP50-209ENST00000432340 ZNF674Q2M3X9 581 aa9.53□□□□□ -0.88
NUP50-209ENST00000432340 GFRA4Q9GZZ7 299 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms