RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 IGKCP01834 107 aa10.29□□□□□ -0.76
HOXC4-202ENST00000430889 PRSS1P07477 247 aa10.29□□□□□ -0.76
HOXC4-202ENST00000430889 RBMY1DP0C7P1 496 aaKnown RBP10.29□□□□□ -0.76
HOXC4-202ENST00000430889 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
HOXC4-202ENST00000430889 C12orf54Q6X4T0 127 aa10.29□□□□□ -0.76
HOXC4-202ENST00000430889 TMEM61Q8N0U2 210 aa10.29□□□□□ -0.76
HOXC4-202ENST00000430889 DUX3Q96PT4 197 aa10.29□□□□□ -0.76
HOXC4-202ENST00000430889 A0A087WX48 190 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 KNCNA6PVL3 124 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 H3BMM0 161 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 SIVA1O15304 175 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 FHL3Q13643 280 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 KLHL30-AS1Q8NEE0 82 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 ORAOV1Q8WV07 137 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 DPM2O94777 84 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 CRYGDP07320 174 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 DEFB131AP59861 70 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 DEFB114Q30KQ6 69 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 CSTL1Q9H114 145 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
HOXC4-202ENST00000430889 COX11Q9Y6N1 276 aa10.28□□□□□ -0.76
HOXC4-202ENST00000430889 IGKV2D-26A0A0A0MRZ7 120 aa10.27□□□□□ -0.77
HOXC4-202ENST00000430889 MORN3Q6PF18 240 aaPredicted RBP10.27□□□□□ -0.77
HOXC4-202ENST00000430889 PCP2Q8IVA1 136 aa10.27□□□□□ -0.77
HOXC4-202ENST00000430889 MRPL35Q9NZE8 188 aaKnown RBP10.27□□□□□ -0.77
HOXC4-202ENST00000430889 FLNAP21333 2647 aaKnown RBP10.26□□□□□ -0.77
HOXC4-202ENST00000430889 TLN2Q9Y4G6 2542 aa10.26□□□□□ -0.77
HOXC4-202ENST00000430889 A0A087WWL8 130 aa10.26□□□□□ -0.77
HOXC4-202ENST00000430889 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
HOXC4-202ENST00000430889 RAX2Q96IS3 184 aa10.26□□□□□ -0.77
HOXC4-202ENST00000430889 MAP6D1Q9H9H5 199 aa10.26□□□□□ -0.77
HOXC4-202ENST00000430889 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
HOXC4-202ENST00000430889 TAX1BP3O14907 124 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 NPSP0C0P6 89 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 C2orf66Q6UXQ4 117 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 Q6ZVH6 145 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 SYT8Q8NBV8 401 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 SPAG8Q99932 426 aaPredicted RBP10.25□□□□□ -0.77
HOXC4-202ENST00000430889 TRBV27A0A0K0K1C4 114 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 M0QY20 66 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 ZNF124Q15973 351 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 SCGB3A1Q96QR1 104 aa10.25□□□□□ -0.77
HOXC4-202ENST00000430889 MYO9AB2RTY4 2548 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 F8VRH5 84 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 RIPPLY3P57055 190 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 TMEM97Q5BJF2 176 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 KHDC1LQ5JSQ8 128 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 LINC00467Q9BRT7 94 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 C16orf95Q9H693 158 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 EDA2RQ9HAV5 297 aa10.24□□□□□ -0.77
HOXC4-202ENST00000430889 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 CBY3A6NI87 242 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 H7C1H1 209 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 RNASE1P07998 156 aaKnown RBP10.23□□□□□ -0.77
HOXC4-202ENST00000430889 PLNP26678 52 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 NMUP48645 174 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 TCTAP57738 103 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 CD300EQ496F6 205 aaPredicted RBP10.23□□□□□ -0.77
HOXC4-202ENST00000430889 NEGR1Q7Z3B1 354 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 ERASQ7Z444 233 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 BAALCQ8WXS3 180 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 JMJD8Q96S16 334 aa10.23□□□□□ -0.77
HOXC4-202ENST00000430889 SONP18583 2426 aaKnown RBP10.23□□□□□ -0.77
HOXC4-202ENST00000430889 TRAV25A0A0B4J276 109 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 VCYO14598 125 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 CD28P10747 220 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 HSD52Q0P140 79 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 ZFP2Q6ZN57 461 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 DYNLRB2Q8TF09 96 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 PTH2Q96A98 100 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 TMEM160Q9NX00 188 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 HIGD1BQ9P298 99 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 SDHAF1A6NFY7 115 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 LINC01549A6NIU2 74 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 IGIPA6NJ69 53 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 TSHBP01222 138 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 SEC11AP67812 179 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 GTSCR1Q86UQ5 136 aa10.22□□□□□ -0.77
HOXC4-202ENST00000430889 CUBNO60494 3623 aa10.21□□□□□ -0.77
HOXC4-202ENST00000430889 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.78
HOXC4-202ENST00000430889 YAE1D1Q9NRH1 226 aa10.21□□□□□ -0.78
HOXC4-202ENST00000430889 F5H697 171 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 CCL24O00175 119 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 ODF3L2Q3SX64 289 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 ZNF876PQ49A33 203 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 FAM74A4Q5TZK3 123 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 LINC01006Q8NI28 216 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 CYSLTR1Q9Y271 337 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 CHTOPQ9Y3Y2 248 aaKnown RBP10.2□□□□□ -0.78
HOXC4-202ENST00000430889 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
HOXC4-202ENST00000430889 CCDC168Q8NDH2 2452 aa10.2□□□□□ -0.78
HOXC4-202ENST00000430889 PRSS29PA6NIE9 313 aa10.19□□□□□ -0.78
HOXC4-202ENST00000430889 TRPT1Q86TN4 253 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms