RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 PPBPP02775 128 aa16■□□□□ 0.15
VSX1-205ENST00000429762 PYY3Q5JQD4 70 aa16■□□□□ 0.15
VSX1-205ENST00000429762 MORN3Q6PF18 240 aaPredicted RBP16■□□□□ 0.15
VSX1-205ENST00000429762 Q6ZWC4 215 aa16■□□□□ 0.15
VSX1-205ENST00000429762 CSNK1G2-AS1Q8NCQ2 148 aa16■□□□□ 0.15
VSX1-205ENST00000429762 RPL39LQ96EH5 51 aaKnown RBP16■□□□□ 0.15
VSX1-205ENST00000429762 MRPL16Q9NX20 251 aaKnown RBP16■□□□□ 0.15
VSX1-205ENST00000429762 GOLT1BQ9Y3E0 138 aa16■□□□□ 0.15
VSX1-205ENST00000429762 CDPF1Q6NVV7 123 aa15.99■□□□□ 0.15
VSX1-205ENST00000429762 FA2HQ7L5A8 372 aa15.99■□□□□ 0.15
VSX1-205ENST00000429762 IGHV1-24A0A0C4DH33 117 aa15.98■□□□□ 0.15
VSX1-205ENST00000429762 CHCHD1Q96BP2 118 aaKnown RBP15.98■□□□□ 0.15
VSX1-205ENST00000429762 MRAP2Q96G30 205 aa15.98■□□□□ 0.15
VSX1-205ENST00000429762 C12orf57Q99622 126 aa15.98■□□□□ 0.15
VSX1-205ENST00000429762 MAP1LC3AQ9H492 121 aa15.98■□□□□ 0.15
VSX1-205ENST00000429762 RASL10AQ92737 203 aa15.98■□□□□ 0.15
VSX1-205ENST00000429762 CSTL1Q9H114 145 aa15.98■□□□□ 0.15
VSX1-205ENST00000429762 IGHV3-73A0A0B4J1V6 119 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 F5H697 171 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 M0R2P5 195 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 WIPF1O43516 503 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 CRYGDP07320 174 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 SUMO4Q6EEV6 95 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 C1QTNF4Q9BXJ3 329 aa15.97■□□□□ 0.15
VSX1-205ENST00000429762 RNASE8Q8TDE3 154 aaKnown RBP15.96■□□□□ 0.15
VSX1-205ENST00000429762 COL6A5A8TX70 2615 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 SMIM6P0DI80 62 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 ZNF56Q15929 161 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 AP5S1Q9NUS5 200 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 KRTAP10-11P60412 298 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 POM121L12Q8N7R1 296 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 LAMTOR2Q9Y2Q5 125 aa15.95■□□□□ 0.14
VSX1-205ENST00000429762 LINC00173Q6ZV60 143 aa15.93■□□□□ 0.14
VSX1-205ENST00000429762 IL17DQ8TAD2 202 aa15.93■□□□□ 0.14
VSX1-205ENST00000429762 KRTDAPP60985 99 aa15.93■□□□□ 0.14
VSX1-205ENST00000429762 ZNF705AQ6ZN79 300 aaPredicted RBP15.93■□□□□ 0.14
VSX1-205ENST00000429762 TMEM263Q8WUH6 116 aaKnown RBP15.93■□□□□ 0.14
VSX1-205ENST00000429762 SPXQ9BT56 116 aa15.93■□□□□ 0.14
VSX1-205ENST00000429762 NACAE9PAV3 2078 aa15.92■□□□□ 0.14
VSX1-205ENST00000429762 TRGV1A0A0A0MS02 117 aa15.91■□□□□ 0.14
VSX1-205ENST00000429762 IGLV2-18A0A075B6J9 118 aa15.9■□□□□ 0.14
VSX1-205ENST00000429762 A0A096LNJ9 63 aa15.9■□□□□ 0.14
VSX1-205ENST00000429762 PLAC8L1A1L4L8 177 aa15.9■□□□□ 0.14
VSX1-205ENST00000429762 JOSD1Q15040 202 aaPredicted RBP15.9■□□□□ 0.14
VSX1-205ENST00000429762 NEGR1Q7Z3B1 354 aa15.9■□□□□ 0.14
VSX1-205ENST00000429762 DEFB104AQ8WTQ1 72 aa15.9■□□□□ 0.14
VSX1-205ENST00000429762 NOP10Q9NPE3 64 aaKnown RBP15.9■□□□□ 0.14
VSX1-205ENST00000429762 TCAPO15273 167 aa15.89■□□□□ 0.13
VSX1-205ENST00000429762 RRN3P1Q2M238 152 aa15.89■□□□□ 0.13
VSX1-205ENST00000429762 CFAP126Q5VTH2 177 aa15.89■□□□□ 0.13
VSX1-205ENST00000429762 Q6ZTI0 123 aa15.89■□□□□ 0.13
VSX1-205ENST00000429762 Q8N8P6 123 aa15.89■□□□□ 0.13
VSX1-205ENST00000429762 IGHV4-30-4P0DP06 118 aa15.89■□□□□ 0.13
VSX1-205ENST00000429762 SCGB1D1O95968 90 aa15.88■□□□□ 0.13
VSX1-205ENST00000429762 C3orf79P0CE67 100 aa15.88■□□□□ 0.13
VSX1-205ENST00000429762 SUMO2P61956 95 aaKnown RBP15.88■□□□□ 0.13
VSX1-205ENST00000429762 C16orf74Q96GX8 76 aa15.88■□□□□ 0.13
VSX1-205ENST00000429762 NXT2Q9NPJ8 142 aaKnown RBP15.88■□□□□ 0.13
VSX1-205ENST00000429762 NIT2Q9NQR4 276 aa15.88■□□□□ 0.13
VSX1-205ENST00000429762 PKD1L1Q8TDX9 2849 aa15.88■□□□□ 0.13
VSX1-205ENST00000429762 G3V4G9 280 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 EMP1P54849 157 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 UFSP1Q6NVU6 142 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 Q6ZSN1 163 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 PTH2Q96A98 100 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 SMIM2Q9BVW6 85 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 A8MWV9 139 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 M0QY20 66 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 P0DMU3 169 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 FAM231AP0DMU4 169 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 FAM231CP0DMU5 169 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 DEFB135Q30KP9 77 aa15.87■□□□□ 0.13
VSX1-205ENST00000429762 LEPROTL1O95214 131 aa15.86■□□□□ 0.13
VSX1-205ENST00000429762 MDFIQ99750 246 aa15.86■□□□□ 0.13
VSX1-205ENST00000429762 PRSS47A8MTI9 375 aa15.86■□□□□ 0.13
VSX1-205ENST00000429762 RS1O15537 224 aa15.85■□□□□ 0.13
VSX1-205ENST00000429762 IGHV3-53P01767 116 aa15.85■□□□□ 0.13
VSX1-205ENST00000429762 ANK2Q01484 3957 aa15.85■□□□□ 0.13
VSX1-205ENST00000429762 C20orf78Q9BR46 151 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 ST20Q9HBF5 79 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 X6R8D5 127 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 LINC01546A6NGU7 62 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 APOC4P55056 127 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 PIK3CD-AS1Q5SR53 167 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 SPATA12Q7Z6I5 190 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 Q8N976 141 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 Q9UF83 564 aa15.84■□□□□ 0.13
VSX1-205ENST00000429762 EGFEM1PQ0D2K5 195 aa15.83■□□□□ 0.12
VSX1-205ENST00000429762 GAGE12BA1L429 117 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 GAGE7O76087 117 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 HBDP02042 147 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 GAGE12FP0CL80 117 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 GAGE12GP0CL81 117 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 GAGE12IP0CL82 117 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 ZNF479Q96JC4 524 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 KIR2DL5BA0A0G2JN68 375 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 KIR2DL5BA0A0G2JPC4 375 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 H0Y8G0 127 aa15.82■□□□□ 0.12
VSX1-205ENST00000429762 DAZ2Q13117 558 aaKnown RBP15.82■□□□□ 0.12
VSX1-205ENST00000429762 KIR2DL5AQ8N109 375 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms