RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 MRPL53Q96EL3 112 aaKnown RBP6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 JPT2Q9H910 190 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
HMGCLL1-206ENST00000428842 H3BVH4 76 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 LINC00614P0C842 121 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 TSPOP30536 169 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 EGFEM1PQ0D2K5 195 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 BATFQ16520 125 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 MCRIP2Q9BUT9 160 aaKnown RBP6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 A0A1B0GUT8 65 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 A0A1B0GW15 77 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 C7orf71A4D174 169 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 OR5AL1P0C617 328 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 STPG4Q8N801 248 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 DNAH7Q8WXX0 4024 aa6.91□□□□□ -1.3
HMGCLL1-206ENST00000428842 WIPF1O43516 503 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 RIGQ13278 110 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 C21orf62-AS1Q17RA5 79 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 SAPCD1Q5SSQ6 148 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 ARL6IP6Q8N6S5 226 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 LINC01587Q99440 93 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 GOLT1BQ9Y3E0 138 aa6.9□□□□□ -1.3
HMGCLL1-206ENST00000428842 SERTM2A0A1B0GWG4 89 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 FABP5P3A8MUU1 101 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 SYS1-DBNDD2H3BUS1 97 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 LEPROTL1O95214 131 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 ARMS2P0C7Q2 107 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 Q6AWC8 147 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 LINC00173Q6ZV60 143 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 COX8CQ7Z4L0 72 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 OR10AG1Q8NH19 301 aa6.9□□□□□ -1.31
HMGCLL1-206ENST00000428842 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 TMEM189A5PLL7 270 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 NPSP0C0P6 89 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 ZNF493Q6ZR52 646 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 CBY3A6NI87 242 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 M0R381 172 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 LYZL1Q6UWQ5 148 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 CSTL1Q9H114 145 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 ST20Q9HBF5 79 aa6.89□□□□□ -1.31
HMGCLL1-206ENST00000428842 IGHV3-73A0A0B4J1V6 119 aa6.88□□□□□ -1.31
HMGCLL1-206ENST00000428842 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
HMGCLL1-206ENST00000428842 GAS8-AS1O95177 125 aa6.88□□□□□ -1.31
HMGCLL1-206ENST00000428842 OR2K2Q8NGT1 345 aa6.88□□□□□ -1.31
HMGCLL1-206ENST00000428842 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
HMGCLL1-206ENST00000428842 FAM159AQ6UWV7 190 aa6.88□□□□□ -1.31
HMGCLL1-206ENST00000428842 TMEM191AQ9H0A3 160 aa6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 Q9UF83 564 aa6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 U3KQK5 164 aa6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 FBLL1A6NHQ2 334 aaKnown RBP6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 MAP1LC3CQ9BXW4 147 aa6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 MRPL16Q9NX20 251 aaKnown RBP6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 HSPB8Q9UJY1 196 aa6.87□□□□□ -1.31
HMGCLL1-206ENST00000428842 A8MTW9 85 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 INSP01308 110 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 LEPP41159 167 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 HINT1P49773 126 aaPredicted RBP6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 LINC01545Q5VT33 79 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 SAMD13Q5VXD3 122 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 ORAOV1Q8WV07 137 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 IGHV1OR15-1A0A075B7D0 117 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 A0A087WWL8 130 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 IGHV3-53P01767 116 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
HMGCLL1-206ENST00000428842 TRAV26-2A0A0B4J265 109 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 hDV102S1A0JD36 115 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 EVI2AP22794 236 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 LINC01559Q495D7 138 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 FAM104BQ5XKR9 115 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 OR11H2Q8NH07 326 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 SCRT2Q9NQ03 307 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 X6R8D5 127 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 PLAC8L1A1L4L8 177 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 SMKR1H3BMG3 65 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 FAM74A4Q5TZK3 123 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 Q6ZTI0 123 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
HMGCLL1-206ENST00000428842 A0A096LNJ9 63 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 GATA1P15976 413 aaPredicted RBP6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 RPS20P60866 119 aaKnown RBP6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 TWIST1Q15672 202 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 C11orf72Q8NBR9 251 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 CELA1Q9UNI1 258 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 LENEPQ9Y5L5 61 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 COX11Q9Y6N1 276 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 STARD9Q9P2P6 4700 aa6.84□□□□□ -1.31
HMGCLL1-206ENST00000428842 D6R8Y8 96 aa6.84□□□□□ -1.32
HMGCLL1-206ENST00000428842 IGLC6P0CF74 106 aa6.84□□□□□ -1.32
HMGCLL1-206ENST00000428842 DEFB130BP0DP73 79 aa6.84□□□□□ -1.32
HMGCLL1-206ENST00000428842 DEFB130AP0DP74 79 aa6.84□□□□□ -1.32
HMGCLL1-206ENST00000428842 SLC25A34Q6PIV7 304 aa6.84□□□□□ -1.32
HMGCLL1-206ENST00000428842 FA2HQ7L5A8 372 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms