RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-205	ENST00000420720	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	ZFP69	Q49AA0	526 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	LINC00299	Q6ZSB3	139 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	C5orf17	Q8NAS9	161 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	DEFB104A	Q8WTQ1	72 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	RAB24	Q969Q5	203 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	PTH2	Q96A98	100 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	DNAJC30	Q96LL9	226 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	MARVELD1	Q9BSK0	173 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	JPT2	Q9H910	190 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720		Q9UF83	564 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720	EPDR1	Q9UM22	224 aa		4.68	□□□□□ -1.66
RFX3-205	ENST00000420720		A8MWV9	139 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	LINC00694	P0DN24	101 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	TOR2A	Q5JU69	321 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	SCX	Q7RTU7	201 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	C14orf178	Q8N769	122 aa	Predicted RBP	4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	CYB561D1	Q8N8Q1	229 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	HSD17B11	Q8NBQ5	300 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	NUDT10	Q8NFP7	164 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	SUN5	Q8TC36	379 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	NUDT11	Q96G61	164 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	LINC00479	Q96M42	142 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	SH3BGRL3	Q9H299	93 aa		4.67	□□□□□ -1.66
RFX3-205	ENST00000420720	IGKV2D-24	A0A075B6R9	120 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	TRAV34	A0A0B4J273	112 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	FABP5P3	A8MUU1	101 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	ATP6V0C	P27449	155 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	FGF8	P55075	233 aa	Predicted RBP	4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	SAPCD1	Q5SSQ6	148 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	UFSP1	Q6NVU6	142 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	ZFP2	Q6ZN57	461 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	OR2G3	Q8NGZ4	309 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	RMI2	Q96E14	147 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	TMEM167B	Q9NRX6	74 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	KLK12	Q9UKR0	248 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	COX11	Q9Y6N1	276 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	URGCP-MRPS24	S4R325	110 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720	ARL2-SNX15	V9GYD0	113 aa		4.66	□□□□□ -1.66
RFX3-205	ENST00000420720		A0A087WWC5	75 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	GRIFIN	A4D1Z8	144 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	RNF222	A6NCQ9	220 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720		B4DEV8	164 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720		H3BVH4	76 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	GAS8-AS1	O95177	125 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	CXorf1	O96002	111 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	FAM74A4	Q5TZK3	123 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	NIT1	Q86X76	327 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720		Q8N976	141 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	CIRBP-AS1	Q8TBR5	109 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	UBE2W	Q96B02	151 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	ANAPC16	Q96DE5	110 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.65	□□□□□ -1.67
RFX3-205	ENST00000420720	CRCT1	Q9UGL9	99 aa		4.65	□□□□□ -1.67
RFX3-205	ENST00000420720		A0A087WWL8	130 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720		A0A1W2PRE2	83 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720		M0R036	132 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	IFNA7	P01567	189 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	MB	P02144	154 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	ARMS2	P0C7Q2	107 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	CRIP1	P50238	77 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	DEFA1	P59665	94 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	DEFA3	P59666	94 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	KRTAP10-4	P60372	401 aa	Predicted RBP	4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	UBE2G2	P60604	165 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	SERF2	P84101	59 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	PIK3CD-AS1	Q5SR53	167 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	OR11H4	Q8NGC9	324 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	PSMG3	Q9BT73	122 aa	Predicted RBP	4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	CHAC1	Q9BUX1	264 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720	IL36B	Q9NZH7	164 aa		4.64	□□□□□ -1.67
RFX3-205	ENST00000420720		A0A087WX48	190 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	TMSB15B	A0A087X1C1	80 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	KRBOX1	C9JBD0	128 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	TMEM262	E9PQX1	116 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720		M0R381	172 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	RHOD	O00212	210 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	PEX7	O00628	323 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	IGLV2-8	P01709	118 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	SEC11B	P0C7V7	166 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	ELOB	Q15370	118 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	KCNIP4	Q6PIL6	250 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720		Q86TA4	180 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	SFRP2	Q96HF1	295 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	TNFSF18	Q9UNG2	199 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	ALG5	Q9Y673	324 aa		4.63	□□□□□ -1.67
RFX3-205	ENST00000420720	SH2D1A	O60880	128 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	OXT	P01178	125 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	TPT1	P13693	172 aa	Known RBP	4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	RPL36A	P83881	106 aa	Known RBP	4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	ZNF726P1	Q15940	193 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720		Q5BKY6	102 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	DNLZ	Q5SXM8	178 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	RPL7L1	Q6DKI1	246 aa	Known RBP	4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	RPL36AL	Q969Q0	106 aa	Known RBP	4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	ZC2HC1A	Q96GY0	325 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	AQP10	Q96PS8	301 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	CHCHD7	Q9BUK0	85 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	PHLDA3	Q9Y5J5	127 aa		4.62	□□□□□ -1.67
RFX3-205	ENST00000420720	CTXND1	A0A1B0GTU2	59 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms