RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 PSMB2P49721 201 aa11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 KLK9Q2XQG4 91 aa11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 ZNF575Q86XF7 245 aa11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 SLC50A1Q9BRV3 221 aa11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 KLK9Q9UKQ9 250 aa11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 HELZ2Q9BYK8 2649 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-204ENST00000420101 IGHV3-11P01762 117 aa11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 IGHG4P01861 327 aa11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 NEXN-AS1Q8NBZ9 246 aa11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 CITED1Q99966 193 aa11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 AGRNO00468 2067 aa11.21□□□□□ -0.61
SEMA4D-204ENST00000420101 APCP25054 2843 aa11.21□□□□□ -0.62
SEMA4D-204ENST00000420101 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-204ENST00000420101 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.62
SEMA4D-204ENST00000420101 RAX2Q96IS3 184 aa11.21□□□□□ -0.62
SEMA4D-204ENST00000420101 USMG5Q96IX5 58 aa11.21□□□□□ -0.62
SEMA4D-204ENST00000420101 RHODO00212 210 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 PPP1R17O96001 155 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 ARL3P36405 182 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 CARD19Q96LW7 228 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 KLK15Q9H2R5 256 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 MSRB1Q9NZV6 116 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
SEMA4D-204ENST00000420101 CD7P09564 240 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 SRSF9Q13242 221 aaKnown RBP eCLIP11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 SMIM2Q9BVW6 85 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 LOC107984156A0A0G2JMH3 177 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 PRSS29PA6NIE9 313 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 SCGB1C2P0DMR2 95 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 HERVK_113P61574 105 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 ARL17AQ8IVW1 177 aa11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 MRPL53Q96EL3 112 aaKnown RBP11.19□□□□□ -0.62
SEMA4D-204ENST00000420101 KRTAP1-1Q07627 177 aa11.18□□□□□ -0.62
SEMA4D-204ENST00000420101 ERCC8Q13216 396 aa11.18□□□□□ -0.62
SEMA4D-204ENST00000420101 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
SEMA4D-204ENST00000420101 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
SEMA4D-204ENST00000420101 SCGB3A1Q96QR1 104 aa11.18□□□□□ -0.62
SEMA4D-204ENST00000420101 CSMD1Q96PZ7 3565 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE12JA6NER3 117 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 ZNF815PA8K554 130 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE7O76087 117 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 IGLV1-40P01703 118 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE12FP0CL80 117 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE12GP0CL81 117 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE12IP0CL82 117 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE2BQ13066 116 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE4Q13068 117 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 FHL3Q13643 280 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 MRPL23Q16540 153 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE2EQ4V326 116 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 PRADC1Q9BSG0 188 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 SPANXDQ9BXN6 97 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 ZNF702PQ9H963 129 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 GAGE2DQ9UEU5 116 aa11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 MAP1AP78559 2803 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-204ENST00000420101 M0R381 172 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 BRI3O95415 125 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 C10orf126Q8N4M7 172 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 CREBBPQ92793 2442 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 SNCGO76070 127 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 CFHR3Q02985 330 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 TMEM86BQ8N661 226 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 METTL26Q96S19 204 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 ZNF580Q9UK33 172 aa11.16□□□□□ -0.62
SEMA4D-204ENST00000420101 TRBV12-3P01733 135 aa11.15□□□□□ -0.62
SEMA4D-204ENST00000420101 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
SEMA4D-204ENST00000420101 GLMPQ8WWB7 406 aa11.15□□□□□ -0.62
SEMA4D-204ENST00000420101 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
SEMA4D-204ENST00000420101 UFC1Q9Y3C8 167 aa11.15□□□□□ -0.62
SEMA4D-204ENST00000420101 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 TCL1BO95988 128 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 GATA1P15976 413 aaPredicted RBP11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 Q8TAT8 98 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 SMR3AQ99954 134 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 CCDC168Q8NDH2 2452 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 IGHV3OR16-13A0A075B7E8 117 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 IGHV3-49A0A0A0MS15 119 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 IGHV3-74A0A0B4J1X5 117 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 P0DMU3 169 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 FAM231AP0DMU4 169 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 FAM231CP0DMU5 169 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 PSMB8P28062 276 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 RPL32P62910 135 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 SS18L2Q9UHA2 77 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 PRO1854Q9UHT4 67 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 LENEPQ9Y5L5 61 aa11.14□□□□□ -0.63
SEMA4D-204ENST00000420101 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
SEMA4D-204ENST00000420101 IFITM1P13164 125 aa11.13□□□□□ -0.63
SEMA4D-204ENST00000420101 NDUFV3P56181 108 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-204ENST00000420101 SUMO2P61956 95 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-204ENST00000420101 ZFP2Q6ZN57 461 aa11.13□□□□□ -0.63
SEMA4D-204ENST00000420101 ANKRD29Q8N6D5 301 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms