RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TRPT1Q86TN4 253 aaKnown RBP10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 DLX4Q92988 240 aaPredicted RBP10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CYSLTR1Q9Y271 337 aa10.76□□□□□ -0.69
HLA-DPA1-242ENST00000419277 F8VRH5 84 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 FGF6P10767 208 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 POLR2KP53803 58 aaKnown RBP10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 PAPPA-AS1Q5QFB9 102 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 SUMO4Q6EEV6 95 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ORAOV1Q8WV07 137 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 FAM110AQ9BQ89 295 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 MAP6D1Q9H9H5 199 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 NDUFA7O95182 113 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 HINT1P49773 126 aaPredicted RBP10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 FXYD7P58549 80 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ZNF415Q09FC8 603 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 RHOHQ15669 191 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 STPG4Q8N801 248 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 SCGB3A1Q96QR1 104 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 MCRIP2Q9BUT9 160 aaKnown RBP10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CSTL1Q9H114 145 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 YAE1D1Q9NRH1 226 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 HIGD1BQ9P298 99 aa10.75□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CBY3A6NI87 242 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 A8MWV9 139 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CCL24O00175 119 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 RIPPLY3P57055 190 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 HILS1P60008 231 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TMEM97Q5BJF2 176 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 C18orf65Q6ZTR6 163 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TMEM141Q96I45 108 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 DKK2Q9UBU2 259 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 RHODO00212 210 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 INSP01308 110 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 HSD52Q0P140 79 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 BVES-AS1Q5T3Y7 98 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TIMM17AQ99595 171 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 SPXQ9BT56 116 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ESM1Q9NQ30 184 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TLN2Q9Y4G6 2542 aa10.73□□□□□ -0.69
HLA-DPA1-242ENST00000419277 F5H697 171 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ZNF876PQ49A33 203 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 MPV17L2Q567V2 206 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 C2orf91Q6ZV80 131 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 SDHAF1A6NFY7 115 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 M0R2P5 195 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CRYGDP07320 174 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ZNF56Q15929 161 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 NSUN5P1Q3KNT7 163 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CD300EQ496F6 205 aaPredicted RBP10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 NEXN-AS1Q8NBZ9 246 aa10.72□□□□□ -0.69
HLA-DPA1-242ENST00000419277 CCDC168Q8NDH2 2452 aa10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 M0QY20 66 aa10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 ZNF25P17030 456 aaPredicted RBP10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 LINC01006Q8NI28 216 aa10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 TMEM208Q9BTX3 173 aa10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 MRPL35Q9NZE8 188 aaKnown RBP10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 SELENOKQ9Y6D0 94 aa10.71□□□□□ -0.69
HLA-DPA1-242ENST00000419277 A6NDN8 102 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 NPSP0C0P6 89 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 NMUP48645 174 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 COX11Q9Y6N1 276 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 AGRNO00468 2067 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 KNCNA6PVL3 124 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 FAM74A4Q5TZK3 123 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 ZFP2Q6ZN57 461 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 DUX3Q96PT4 197 aa10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 CHTOPQ9Y3Y2 248 aaKnown RBP10.7□□□□□ -0.7
HLA-DPA1-242ENST00000419277 A0A087WWL8 130 aa10.69□□□□□ -0.7
HLA-DPA1-242ENST00000419277 OR11H12B2RN74 326 aa10.69□□□□□ -0.7
HLA-DPA1-242ENST00000419277 UNC79Q9P2D8 2635 aa10.68□□□□□ -0.7
HLA-DPA1-242ENST00000419277 PDZD2O15018 2839 aa10.68□□□□□ -0.7
HLA-DPA1-242ENST00000419277 STHQ8IWL8 128 aa10.68□□□□□ -0.7
HLA-DPA1-242ENST00000419277 BAALCQ8WXS3 180 aa10.68□□□□□ -0.7
HLA-DPA1-242ENST00000419277 HELZ2Q9BYK8 2649 aaKnown RBP10.68□□□□□ -0.7
HLA-DPA1-242ENST00000419277 I3L3M4 83 aa10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 CD28P10747 220 aa10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 CRYBA4P53673 196 aa10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 TAL2Q16559 108 aa10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 ODF3L2Q3SX64 289 aa10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 CITED2Q99967 270 aaPredicted RBP10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 TP53TG1Q9Y2A0 90 aa10.67□□□□□ -0.7
HLA-DPA1-242ENST00000419277 SONP18583 2426 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 RBMY1BA6NDE4 496 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 RBMY1EA6NEQ0 496 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 RBMY1DP0C7P1 496 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 PMVKQ15126 192 aa10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
HLA-DPA1-242ENST00000419277 BEAN1Q3B7T3 259 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms