RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 DEFB1P60022 68 aa10.05□□□□□ -0.8
SSR4P1-201ENST00000415143 Q6ZSV7 163 aa10.05□□□□□ -0.8
SSR4P1-201ENST00000415143 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 TCAPO15273 167 aa10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 KIR3DS1Q14943 382 aa10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 Q6ZQT7 251 aa10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 ZNF418Q8TF45 676 aaPredicted RBP10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 C9orf85Q96MD7 179 aa10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
SSR4P1-201ENST00000415143 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 IGHV3-16A0A0C4DH30 117 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 SIVA1O15304 175 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 DLEU1O43261 78 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 HLA-DRB4P13762 266 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 JMJD8Q96S16 334 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 SPAG8Q99932 426 aaPredicted RBP10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 C16orf95Q9H693 158 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 HLA-DRB4X5D2U9 266 aa10.03□□□□□ -0.8
SSR4P1-201ENST00000415143 A8MTW9 85 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 VCYO14598 125 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 DPM2O94777 84 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 IGKCP01834 107 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 DEFB131AP59861 70 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 RASL10AQ92737 203 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 RAX2Q96IS3 184 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 C18orf15Q96N68 181 aa10.02□□□□□ -0.81
SSR4P1-201ENST00000415143 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 TRAV12-1A0A0B4J245 112 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 F5H697 171 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 GAS8-AS1O95177 125 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 IGKV3-20P01619 116 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 RNASE1P07998 156 aaKnown RBP10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 PLNP26678 52 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 FXYD7P58549 80 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 SPINK13Q1W4C9 94 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 PIK3CD-AS1Q5SR53 167 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 HIST2H2BDQ6DRA6 164 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 LINC00469Q8N7U9 141 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 CLUHP3Q96NS8 147 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 SCGB3A1Q96QR1 104 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 KIR2DL4Q99706 377 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 TSSC4Q9Y5U2 329 aaPredicted RBP10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 SELENOKQ9Y6D0 94 aa10.01□□□□□ -0.81
SSR4P1-201ENST00000415143 CBY3A6NI87 242 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 H7C1H1 209 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 HINT1P49773 126 aaPredicted RBP10□□□□□ -0.81
SSR4P1-201ENST00000415143 DEFB136Q30KP8 78 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 DEFB114Q30KQ6 69 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 AMTNQ6UX39 209 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 DLX4Q92988 240 aaPredicted RBP10□□□□□ -0.81
SSR4P1-201ENST00000415143 MCRIP2Q9BUT9 160 aaKnown RBP10□□□□□ -0.81
SSR4P1-201ENST00000415143 ZMAT4Q9H898 229 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 KIF25-AS1Q9Y6Z4 181 aa10□□□□□ -0.81
SSR4P1-201ENST00000415143 A0A087WX48 190 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 TRBV6-5A0A0K0K1A5 114 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 H3BMM0 161 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 ODF1Q14990 250 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 ADAMTSL5Q6ZMM2 481 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 TRPT1Q86TN4 253 aaKnown RBP9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 PTH2Q96A98 100 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 LINC00467Q9BRT7 94 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 CSTL1Q9H114 145 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 TRRAPQ9Y4A5 3859 aa9.99□□□□□ -0.81
SSR4P1-201ENST00000415143 TRAV12-2A0A075B6T6 113 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 CCL24O00175 119 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 ZNF415Q09FC8 603 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 TMEM97Q5BJF2 176 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 C18orf65Q6ZTR6 163 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 BOD1L2Q8IYS8 172 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 TMEM61Q8N0U2 210 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 Q8N1Y9 231 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
SSR4P1-201ENST00000415143 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 LINC00315P59091 139 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 GAGE1Q13065 139 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 ZNF56Q15929 161 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 PAPPA-AS1Q5QFB9 102 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 SUMO4Q6EEV6 95 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 ERASQ7Z444 233 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 RPL39LQ96EH5 51 aaKnown RBP9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 TMEM141Q96I45 108 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 SPXQ9BT56 116 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 DKK2Q9UBU2 259 aa9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 PRKDCP78527 4128 aaKnown RBP9.97□□□□□ -0.81
SSR4P1-201ENST00000415143 A8MWV9 139 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 NDUFA7O95182 113 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 INSP01308 110 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 ZNF25P17030 456 aaPredicted RBP9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 SEC11AP67812 179 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 FHL3Q13643 280 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 ZNF876PQ49A33 203 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 ANKRD39Q53RE8 183 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 C2orf66Q6UXQ4 117 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 STPG4Q8N801 248 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 DUX3Q96PT4 197 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 ZNF256Q9Y2P7 627 aaPredicted RBP9.96□□□□□ -0.82
SSR4P1-201ENST00000415143 NBEAL2Q6ZNJ1 2754 aa9.95□□□□□ -0.82
SSR4P1-201ENST00000415143 F8VRH5 84 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms