RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 CHCHD5Q9BSY4 110 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 NPCDR1Q9BY65 106 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 MRPS26Q9BYN8 205 aaKnown RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 NAA50Q9GZZ1 169 aaKnown RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 JPT2Q9H910 190 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 OTORQ9NRC9 128 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 KCNIP2Q9NS61 270 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 C11orf21Q9P2W6 132 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 LINC00474Q9P2X8 69 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 LSM5Q9Y4Y9 91 aaKnown RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRAV6A0A075B6T7 132 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGKV2-24A0A0C4DH68 120 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 MUC21A0A0G2JKD1 596 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGSF23A1L1A6 192 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 NAP1L6A6NFF2 107 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 FABP5P3A8MUU1 101 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 FAM25EA8MYX2 175 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 NDUFB6O95139 128 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZNF80P51504 273 aaPredicted RBP1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 RBX1P62877 108 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 CACNG7P62955 275 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 REG3AQ06141 175 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 SPCS2Q15005 226 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 CNPY1Q3B7I2 92 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 PYDC2Q56P42 97 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 KHDC3LQ587J8 217 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 TMEM97Q5BJF2 176 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 SAPCD1Q5SSQ6 148 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 CLPSL2Q6UWE3 100 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 OR11H4Q8NGC9 324 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 OR10G8Q8NGN5 311 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 SFRP2Q96HF1 295 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 SGK494Q96LW2 274 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 WDR61Q9GZS3 305 aaKnown RBP1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 IL36BQ9NZH7 164 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 MBD2Q9UBB5 411 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 FLVCR2Q9UPI3 526 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 PSG8Q9UQ74 426 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 PKIGQ9Y2B9 76 aa1.46□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGLV1-50A0A075B6I6 118 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 TRBV25-1A0A075B6N4 114 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 TRAV1-1A0A0B4J248 108 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGKV3D-20A0A0C4DH25 116 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 A0A1B0GUV1 79 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 A0A1W2PPV4 95 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 CENPXA8MT69 81 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 H3BVH4 76 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 M0R381 172 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 TCRAP04437 139 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 ARMS2P0C7Q2 107 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 TPT1P13693 172 aaKnown RBP1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 SULT1A2P50226 295 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 RAB5CP51148 216 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 RAB4BP61018 213 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 GNG5P63218 68 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 FLI1Q01543 452 aaPredicted RBP1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 NHLH2Q02577 135 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 GAGE6Q13070 117 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 IL15RAQ13261 267 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 RAB32Q13637 225 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 HIGD2BQ4VC39 106 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 LCE2DQ5TA82 110 aaPredicted RBP1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 PQLC2Q6ZP29 291 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 NTM-AS1Q6ZSK4 140 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 PRNTQ86SH4 94 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZFP82Q8N141 532 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 PRR26Q8N8Z3 221 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 FER1L6-AS1Q8NA97 138 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 C5orf17Q8NAS9 161 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 OR5C1Q8NGR4 320 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 DERL1Q9BUN8 251 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 C11orf1Q9H5F2 150 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 PHLDA3Q9Y5J5 127 aa1.45□□□□□ -2.18
RNU4-53P-201ENST00000410828 A0A096LNI7 61 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 GVQW2A0A096LPI5 108 aaPredicted RBP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 IGHV1-24A0A0C4DH33 117 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 TRBV6-1A0A0K0K1D8 114 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 GRIFINA4D1Z8 144 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 GAGE12HA6NDE8 117 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 A6NHS1 94 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 B4DEV8 164 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 KRBOX1C9JBD0 128 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 F5H697 171 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 H3BMQ9 156 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 M0R036 132 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 NOL3O60936 208 aaKnown RBP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 EIF3GO75821 320 aaKnown RBP eCLIP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 MT-ND6P03923 174 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 S100A5P33763 92 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 RPL13AP40429 203 aaKnown RBP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 UBE2D1P51668 147 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 TMBIM6P55061 237 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 RAB2AP61019 212 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 SUMO1P63165 101 aaKnown RBP1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 ZNF56Q15929 161 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 IQCJQ1A5X6 159 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 DNLZQ5SXM8 178 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 TRIQKQ629K1 86 aa1.44□□□□□ -2.18
RNU4-53P-201ENST00000410828 PRR27Q6MZM9 219 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms