RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 OR11H12B2RN74 326 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 OR11H1Q8NG94 326 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 OR11H2Q8NH07 326 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 MDFICQ9P1T7 246 aa11.81□□□□□ -0.52
HOXD3-202ENST00000410016 MYO18BQ8IUG5 2567 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 TRBV7-3A0A075B6L6 115 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 TRAV12-2A0A075B6T6 113 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 E9PLD3 99 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 SAP30O75446 220 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 ZFP2Q6ZN57 461 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 AGRNO00468 2067 aa11.8□□□□□ -0.52
HOXD3-202ENST00000410016 LINC01619G3V211 115 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 G3V4G9 280 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 CYSLTR1Q9Y271 337 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 LGALS9O00182 355 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 VCYO14598 125 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 SYNJ2BPP57105 145 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
HOXD3-202ENST00000410016 Q5PR19 223 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 MAPK1IP1LQ8NDC0 245 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 DEFB104AQ8WTQ1 72 aa11.79□□□□□ -0.52
HOXD3-202ENST00000410016 J3QLI3 93 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 TGFAP01135 160 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 IGKV3-20P01619 116 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 Q8N1Y9 231 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 HIST1H4GQ99525 98 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 PRADC1Q9BSG0 188 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 TP53TG1Q9Y2A0 90 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 DOPEY2Q9Y3R5 2298 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 TRBV27A0A0K0K1C4 114 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 C12orf74Q32Q52 190 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 MXRA5Q9NR99 2828 aa11.78□□□□□ -0.52
HOXD3-202ENST00000410016 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.52
HOXD3-202ENST00000410016 SDHAF1A6NFY7 115 aa11.77□□□□□ -0.52
HOXD3-202ENST00000410016 F5H697 171 aa11.77□□□□□ -0.52
HOXD3-202ENST00000410016 ACACBO00763 2458 aa11.77□□□□□ -0.52
HOXD3-202ENST00000410016 LGALS1P09382 135 aaKnown RBP11.77□□□□□ -0.52
HOXD3-202ENST00000410016 IGLL5B9A064 214 aa11.77□□□□□ -0.53
HOXD3-202ENST00000410016 COX6B1P14854 86 aa11.77□□□□□ -0.53
HOXD3-202ENST00000410016 RPL39P62891 51 aaKnown RBP11.77□□□□□ -0.53
HOXD3-202ENST00000410016 POLQO75417 2590 aa11.77□□□□□ -0.53
HOXD3-202ENST00000410016 LINC01549A6NIU2 74 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
HOXD3-202ENST00000410016 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 VPREB3Q9UKI3 123 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 SORL1Q92673 2214 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 A0A1B0GWB2 263 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 M0QY20 66 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 RIPPLY3P57055 190 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 SPINK13Q1W4C9 94 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 DUX5Q96PT3 197 aa11.76□□□□□ -0.53
HOXD3-202ENST00000410016 IGHV1OR15-1A0A075B7D0 117 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 FSHBP01225 129 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 ELANEP08246 267 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 FAM74A4Q5TZK3 123 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 RNF152Q8N8N0 203 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 ZNF702PQ9H963 129 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 HOXD3P31249 432 aaPredicted RBP11.75□□□□□ -0.53
HOXD3-202ENST00000410016 PMVKQ15126 192 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 AMTNQ6UX39 209 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 Q6YL49 198 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 UBE2E2Q96LR5 201 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 TIMM17AQ99595 171 aa11.75□□□□□ -0.53
HOXD3-202ENST00000410016 CREBBPQ92793 2442 aa11.74□□□□□ -0.53
HOXD3-202ENST00000410016 TMEM141Q96I45 108 aa11.74□□□□□ -0.53
HOXD3-202ENST00000410016 ANKRD17O75179 2603 aaKnown RBP11.74□□□□□ -0.53
HOXD3-202ENST00000410016 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
HOXD3-202ENST00000410016 EMP1P54849 157 aa11.73□□□□□ -0.53
HOXD3-202ENST00000410016 CD300EQ496F6 205 aaPredicted RBP11.73□□□□□ -0.53
HOXD3-202ENST00000410016 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
HOXD3-202ENST00000410016 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
HOXD3-202ENST00000410016 CENPEQ02224 2701 aa11.73□□□□□ -0.53
HOXD3-202ENST00000410016 ZNF815PA8K554 130 aa11.72□□□□□ -0.53
HOXD3-202ENST00000410016 ZNF479Q96JC4 524 aa11.72□□□□□ -0.53
HOXD3-202ENST00000410016 PAPPA-AS1Q5QFB9 102 aa11.72□□□□□ -0.53
HOXD3-202ENST00000410016 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
HOXD3-202ENST00000410016 PLEKHB2Q96CS7 222 aa11.72□□□□□ -0.53
HOXD3-202ENST00000410016 ZNF876PQ49A33 203 aa11.71□□□□□ -0.53
HOXD3-202ENST00000410016 ZNF256Q9Y2P7 627 aaPredicted RBP11.71□□□□□ -0.53
HOXD3-202ENST00000410016 ZNF56Q15929 161 aa11.71□□□□□ -0.54
HOXD3-202ENST00000410016 ZNRF2Q8NHG8 242 aa11.71□□□□□ -0.54
HOXD3-202ENST00000410016 FAM208BQ5VWN6 2430 aa11.71□□□□□ -0.54
HOXD3-202ENST00000410016 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
HOXD3-202ENST00000410016 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 P0DMU3 169 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 FAM231AP0DMU4 169 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 FAM231CP0DMU5 169 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
HOXD3-202ENST00000410016 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
HOXD3-202ENST00000410016 HOXA3O43365 443 aaPredicted RBP11.7□□□□□ -0.54
HOXD3-202ENST00000410016 IGHV4-31P0DP07 118 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 TCTEX1D4Q5JR98 221 aa11.7□□□□□ -0.54
HOXD3-202ENST00000410016 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
HOXD3-202ENST00000410016 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
HOXD3-202ENST00000410016 PTPN13Q12923 2485 aa11.69□□□□□ -0.54
HOXD3-202ENST00000410016 C18orf65Q6ZTR6 163 aa11.69□□□□□ -0.54
HOXD3-202ENST00000410016 TRPT1Q86TN4 253 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms