RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SELENOKQ9Y6D0 94 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 MAP1AP78559 2803 aaPredicted RBP5.54□□□□□ -1.52
CXCR4-202ENST00000409817 IGHV3-16A0A0C4DH30 117 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 H3BMM0 161 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 ATP5LO75964 103 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 G0S2P27469 103 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
CXCR4-202ENST00000409817 LAGE3Q14657 143 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 SPINK13Q1W4C9 94 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 ORMDL2Q53FV1 153 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 PIK3CD-AS1Q5SR53 167 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 C14orf178Q8N769 122 aaPredicted RBP5.54□□□□□ -1.52
CXCR4-202ENST00000409817 WWC2-AS2Q96NR7 200 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 LINC00467Q9BRT7 94 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 TLN2Q9Y4G6 2542 aa5.54□□□□□ -1.52
CXCR4-202ENST00000409817 GAS8-AS1O95177 125 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 CD28P10747 220 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 IGLL1P15814 213 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 ATOH7Q8N100 152 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 MAP6D1Q9H9H5 199 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 MRPS16Q9Y3D3 137 aaKnown RBP5.53□□□□□ -1.52
CXCR4-202ENST00000409817 KIF25-AS1Q9Y6Z4 181 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 MYO9AB2RTY4 2548 aa5.53□□□□□ -1.52
CXCR4-202ENST00000409817 FLNAP21333 2647 aaKnown RBP5.53□□□□□ -1.52
CXCR4-202ENST00000409817 HELZ2Q9BYK8 2649 aaKnown RBP5.53□□□□□ -1.52
CXCR4-202ENST00000409817 TRAV12-2A0A075B6T6 113 aa5.52□□□□□ -1.53
CXCR4-202ENST00000409817 IGKV3-20P01619 116 aa5.52□□□□□ -1.53
CXCR4-202ENST00000409817 GATA1P15976 413 aaPredicted RBP5.52□□□□□ -1.53
CXCR4-202ENST00000409817 HNRNPA3P51991 378 aaKnown RBP5.52□□□□□ -1.53
CXCR4-202ENST00000409817 CD300EQ496F6 205 aaPredicted RBP5.52□□□□□ -1.53
CXCR4-202ENST00000409817 RASL10AQ92737 203 aa5.52□□□□□ -1.53
CXCR4-202ENST00000409817 PTH2Q96A98 100 aa5.52□□□□□ -1.53
CXCR4-202ENST00000409817 DUX3Q96PT4 197 aa5.52□□□□□ -1.53
CXCR4-202ENST00000409817 CITED2Q99967 270 aaPredicted RBP5.52□□□□□ -1.53
CXCR4-202ENST00000409817 ZNF256Q9Y2P7 627 aaPredicted RBP5.52□□□□□ -1.53
CXCR4-202ENST00000409817 GOLT1BQ9Y3E0 138 aa5.52□□□□□ -1.53
CXCR4-202ENST00000409817 SONP18583 2426 aaKnown RBP5.52□□□□□ -1.53
CXCR4-202ENST00000409817 TRAV26-2A0A0B4J265 109 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 MGPP08493 103 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 LINC00315P59091 139 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 Q6ZN92 141 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 LURAP1LQ8IV03 231 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 TMEM158Q8WZ71 300 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 FAM110AQ9BQ89 295 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 PMCHL2Q9BQD1 86 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 PDZD2O15018 2839 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 TENM4Q6N022 2769 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 TRBV6-5A0A0K0K1A5 114 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 KNCNA6PVL3 124 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 PROK1P58294 105 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 SNHG12Q9BXW3 62 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 MXRA5Q9NR99 2828 aa5.51□□□□□ -1.53
CXCR4-202ENST00000409817 UNC79Q9P2D8 2635 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 CBY3A6NI87 242 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 H0Y8G0 127 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 TCAPO15273 167 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 NUDT3O95989 172 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 INSP01308 110 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 MAJINQ3KP22 176 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 SLC25A34Q6PIV7 304 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 EDA2RQ9HAV5 297 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 MDFICQ9P1T7 246 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 MUC4Q99102 2169 aa5.5□□□□□ -1.53
CXCR4-202ENST00000409817 OR11H12B2RN74 326 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 VCYO14598 125 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 LY6G6DO95868 133 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 NUTF2P61970 127 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 ZNF415Q09FC8 603 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 TOMM6Q96B49 74 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 SPXQ9BT56 116 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 HIVEP2P31629 2446 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 NBPF19A0A087WUL8 3843 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 TRAV12-1A0A0B4J245 112 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 hDV102S1A0JD36 115 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 RBMY1BA6NDE4 496 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 RBMY1EA6NEQ0 496 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 A8MWV9 139 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 H7C1H1 209 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 CRYGDP07320 174 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 PRSS1P07477 247 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 RBMY1DP0C7P1 496 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 POLR2KP53803 58 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 FXYD7P58549 80 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 ZNF876PQ49A33 203 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 SUMO4Q6EEV6 95 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 TRPT1Q86TN4 253 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 NDUFA11Q86Y39 141 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 STHQ8IWL8 128 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 C11orf44Q8N8P7 122 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 RPL39LQ96EH5 51 aaKnown RBP5.49□□□□□ -1.53
CXCR4-202ENST00000409817 KIR2DL4Q99706 377 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 AGRNO00468 2067 aa5.49□□□□□ -1.53
CXCR4-202ENST00000409817 SORL1Q92673 2214 aa5.48□□□□□ -1.53
CXCR4-202ENST00000409817 TRBV27A0A0K0K1C4 114 aa5.48□□□□□ -1.53
CXCR4-202ENST00000409817 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
CXCR4-202ENST00000409817 F5H697 171 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms