RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CSTL1Q9H114 145 aa10.18□□□□□ -0.78
GPNMB-203ENST00000409458 LOC389332A0A1B0GUA5 103 aa10.17□□□□□ -0.78
GPNMB-203ENST00000409458 M0R2P5 195 aa10.17□□□□□ -0.78
GPNMB-203ENST00000409458 TNFRSF6BO95407 300 aa10.17□□□□□ -0.78
GPNMB-203ENST00000409458 SMIM17P0DL12 118 aa10.17□□□□□ -0.78
GPNMB-203ENST00000409458 ZNF705AQ6ZN79 300 aaPredicted RBP10.17□□□□□ -0.78
GPNMB-203ENST00000409458 NRACQ8N912 160 aa10.17□□□□□ -0.78
GPNMB-203ENST00000409458 LAMTOR2Q9Y2Q5 125 aa10.17□□□□□ -0.78
GPNMB-203ENST00000409458 IFI27P40305 119 aaPredicted RBP10.16□□□□□ -0.78
GPNMB-203ENST00000409458 AMTP48728 403 aa10.16□□□□□ -0.78
GPNMB-203ENST00000409458 KRTAP10-11P60412 298 aa10.16□□□□□ -0.78
GPNMB-203ENST00000409458 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
GPNMB-203ENST00000409458 FAM19A2Q8N3H0 131 aa10.16□□□□□ -0.78
GPNMB-203ENST00000409458 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
GPNMB-203ENST00000409458 CHCHD1Q96BP2 118 aaKnown RBP10.16□□□□□ -0.78
GPNMB-203ENST00000409458 HSBP1O75506 76 aa10.15□□□□□ -0.78
GPNMB-203ENST00000409458 CRYGDP07320 174 aa10.15□□□□□ -0.78
GPNMB-203ENST00000409458 LINC00614P0C842 121 aa10.15□□□□□ -0.78
GPNMB-203ENST00000409458 PTH2Q96A98 100 aa10.15□□□□□ -0.78
GPNMB-203ENST00000409458 SPXQ9BT56 116 aa10.15□□□□□ -0.78
GPNMB-203ENST00000409458 MAP1LC3AQ9H492 121 aa10.15□□□□□ -0.78
GPNMB-203ENST00000409458 MRPL16Q9NX20 251 aaKnown RBP10.15□□□□□ -0.78
GPNMB-203ENST00000409458 EGFEM1PQ0D2K5 195 aa10.15□□□□□ -0.79
GPNMB-203ENST00000409458 PMCHL1Q16048 86 aa10.15□□□□□ -0.79
GPNMB-203ENST00000409458 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.79
GPNMB-203ENST00000409458 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.79
GPNMB-203ENST00000409458 RASL10AQ92737 203 aa10.15□□□□□ -0.79
GPNMB-203ENST00000409458 PLAC8L1A1L4L8 177 aa10.14□□□□□ -0.79
GPNMB-203ENST00000409458 FA2HQ7L5A8 372 aa10.14□□□□□ -0.79
GPNMB-203ENST00000409458 RPL39LQ96EH5 51 aaKnown RBP10.14□□□□□ -0.79
GPNMB-203ENST00000409458 IGHV1-24A0A0C4DH33 117 aa10.13□□□□□ -0.79
GPNMB-203ENST00000409458 IGHV4-30-4P0DP06 118 aa10.13□□□□□ -0.79
GPNMB-203ENST00000409458 ZNF56Q15929 161 aa10.13□□□□□ -0.79
GPNMB-203ENST00000409458 PIK3CD-AS1Q5SR53 167 aa10.13□□□□□ -0.79
GPNMB-203ENST00000409458 C16orf74Q96GX8 76 aa10.13□□□□□ -0.79
GPNMB-203ENST00000409458 COL6A5A8TX70 2615 aa10.13□□□□□ -0.79
GPNMB-203ENST00000409458 UFSP1Q6NVU6 142 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 Q6ZWC4 215 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 AP5S1Q9NUS5 200 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 NACAE9PAV3 2078 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 A8MWV9 139 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 F5H697 171 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 G3V4G9 280 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 APOC4P55056 127 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 RRN3P1Q2M238 152 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 KIR2DL5BQ8NHK3 375 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 MDFIQ99750 246 aa10.12□□□□□ -0.79
GPNMB-203ENST00000409458 IGLV2-18A0A075B6J9 118 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 TRGV1A0A0A0MS02 117 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 IGHV3-73A0A0B4J1V6 119 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 PRSS47A8MTI9 375 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 PYY3Q5JQD4 70 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 CFAP126Q5VTH2 177 aa10.11□□□□□ -0.79
GPNMB-203ENST00000409458 LINC00518Q8N0U6 118 aa10.1□□□□□ -0.79
GPNMB-203ENST00000409458 NOP10Q9NPE3 64 aaKnown RBP10.1□□□□□ -0.79
GPNMB-203ENST00000409458 NXT2Q9NPJ8 142 aaKnown RBP10.1□□□□□ -0.79
GPNMB-203ENST00000409458 X6R8D5 127 aa10.1□□□□□ -0.79
GPNMB-203ENST00000409458 LINC01546A6NGU7 62 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 M0QY20 66 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 RS1O15537 224 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 SUMO2P61956 95 aaKnown RBP10.09□□□□□ -0.79
GPNMB-203ENST00000409458 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
GPNMB-203ENST00000409458 DEFB135Q30KP9 77 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 Q6ZTI0 123 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 Q8N8P6 123 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 NDUFAF3Q9BU61 184 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 A0A096LNJ9 63 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 SAMD5Q5TGI4 173 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 C20orf78Q9BR46 151 aa10.09□□□□□ -0.79
GPNMB-203ENST00000409458 PKD1L1Q8TDX9 2849 aa10.08□□□□□ -0.8
GPNMB-203ENST00000409458 PPP1R17O96001 155 aa10.08□□□□□ -0.8
GPNMB-203ENST00000409458 LGALS9BQ3B8N2 356 aa10.08□□□□□ -0.8
GPNMB-203ENST00000409458 C12orf57Q99622 126 aa10.08□□□□□ -0.8
GPNMB-203ENST00000409458 RHODO00212 210 aa10.07□□□□□ -0.8
GPNMB-203ENST00000409458 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
GPNMB-203ENST00000409458 CDPF1Q6NVV7 123 aa10.07□□□□□ -0.8
GPNMB-203ENST00000409458 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
GPNMB-203ENST00000409458 OVOL2Q9BRP0 275 aa10.07□□□□□ -0.8
GPNMB-203ENST00000409458 TCAPO15273 167 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 Q6ZSN1 163 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 EDA2RQ9HAV5 297 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 ZMAT5Q9UDW3 170 aaKnown RBP10.06□□□□□ -0.8
GPNMB-203ENST00000409458 TRBV6-5A0A0K0K1A5 114 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 EMP1P54849 157 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 KRTDAPP60985 99 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 NEGR1Q7Z3B1 354 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 OR4C5Q8NGB2 326 aa10.06□□□□□ -0.8
GPNMB-203ENST00000409458 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
GPNMB-203ENST00000409458 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
GPNMB-203ENST00000409458 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
GPNMB-203ENST00000409458 A8MZ25 164 aa10.05□□□□□ -0.8
GPNMB-203ENST00000409458 GAGE7O76087 117 aa10.05□□□□□ -0.8
GPNMB-203ENST00000409458 LEPROTL1O95214 131 aa10.05□□□□□ -0.8
GPNMB-203ENST00000409458 HBDP02042 147 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms