RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 OR10G8Q8NGN5 311 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 ODF3Q96PU9 254 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 SLC50A1Q9BRV3 221 aa8.54□□□□□ -1.04
CHRNA1-203ENST00000409219 GCGP01275 180 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 NBEAP1P0C6P0 100 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 LEPP41159 167 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 SLAQ13239 276 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 CENPWQ5EE01 88 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 S100A7AQ86SG5 101 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 RNF24Q9Y225 148 aa8.53□□□□□ -1.04
CHRNA1-203ENST00000409219 PEX7O00628 323 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BKO60814 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 IGLV2-8P01709 118 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BJP06899 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BOP23527 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BBP33778 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BDP58876 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BCP62807 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 WFDC2Q14508 124 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST2H2BEQ16778 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 ANXA2RQ3ZCQ2 193 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BHQ93079 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BNQ99877 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H2BMQ99879 126 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 Q9HAA7 133 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 OSTCQ9NRP0 149 aa8.52□□□□□ -1.05
CHRNA1-203ENST00000409219 C7orf71A4D174 169 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 H3BTX0 84 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 S100A9P06702 114 aaKnown RBP8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 HIST1H1EP10412 219 aaKnown RBP8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 ZNF415Q09FC8 603 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 LINC00518Q8N0U6 118 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 C5orf17Q8NAS9 161 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 SMIM12Q96EX1 92 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 IL36BQ9NZH7 164 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 IBA57-AS1B1ANH7 110 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 S100A8P05109 93 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 TMEM183BQ1AE95 376 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 IBA57Q5T440 356 aaKnown RBP8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 EPDR1Q9UM22 224 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 V9GYV3 84 aa8.51□□□□□ -1.05
CHRNA1-203ENST00000409219 TRGC1P0CF51 173 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 GYPEP15421 78 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 RANP62826 216 aaKnown RBP8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 BPIFA4PQ86YQ2 179 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 OTORQ9NRC9 128 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
CHRNA1-203ENST00000409219 IGHV3-38A0A0C4DH36 116 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 PGPA6NDG6 321 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 KLLNB2CW77 178 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 IGLC2P0DOY2 106 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 AKR1D1P51857 326 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 BLNKQ8WV28 456 aa8.49□□□□□ -1.05
CHRNA1-203ENST00000409219 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 TRBV6-1A0A0K0K1D8 114 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 RS1O15537 224 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 HNRNPA3P51991 378 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 NDUFA6P56556 154 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 COA6Q5JTJ3 125 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 FMC1Q96HJ9 113 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 ZNF479Q96JC4 524 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 CHAC1Q9BUX1 264 aa8.48□□□□□ -1.05
CHRNA1-203ENST00000409219 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 ORM1P02763 201 aa8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 TCRAP04437 139 aa8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 PDE6HQ13956 83 aa8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 FAM19A4Q96LR4 140 aa8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 LINC00479Q96M42 142 aa8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 MLST8Q9BVC4 326 aa8.47□□□□□ -1.05
CHRNA1-203ENST00000409219 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 LECT2O14960 151 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 LTAP01374 205 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 SMIM6P0DI80 62 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 UBE2G1P62253 170 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 GNG5P63218 68 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 ERCC8Q13216 396 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 COX19Q49B96 90 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 ARL6IP6Q8N6S5 226 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.05
CHRNA1-203ENST00000409219 TRAV34A0A0B4J273 112 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 MGST1P10620 155 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 RNASE4P34096 147 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 RPL19P84098 196 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 PRR9Q5T870 116 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 Q6ZQT7 251 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 HIST3H2BBQ8N257 126 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 RNASE7Q9H1E1 156 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 ZNF492Q9P255 531 aa8.45□□□□□ -1.06
CHRNA1-203ENST00000409219 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms