RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 KALRNO60229 2985 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 ATP5G1P05496 136 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 RNF182Q8N6D2 247 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 COL12A1Q99715 3063 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 CSMD1Q96PZ7 3565 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 IGHV3-35A0A0C4DH35 117 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 HERVK_113P61574 105 aa12.31□□□□□ -0.44
COL4A3BP-204ENST00000405807 TRAV41A0A0B4J266 112 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 BUB3O43684 328 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 AGPAT4-IT1Q9H0P7 198 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 PRORYQ9H606 182 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 C11orf21Q9P2W6 132 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 TPRP12270 2363 aaKnown RBP12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 TRAV26-2A0A0B4J265 109 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 ODF3BA8MYP8 253 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 F8VRH5 84 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.3□□□□□ -0.44
COL4A3BP-204ENST00000405807 M0R1W7 72 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 SPANXN1Q5VSR9 72 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 IGHV4-4A0A075B6R2 117 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 IGHV7-4-1A0A0J9YVY3 117 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 FAM240AA0A1B0GVK7 77 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 CNOT1A5YKK6 2376 aaKnown RBP12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 ZNF22P17026 224 aaPredicted RBP12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 IL17DQ8TAD2 202 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 C10orf105Q8TEF2 133 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 C9orf85Q96MD7 179 aa12.29□□□□□ -0.44
COL4A3BP-204ENST00000405807 ADGRG4Q8IZF6 3080 aa12.28□□□□□ -0.44
COL4A3BP-204ENST00000405807 NBL1P41271 181 aa12.28□□□□□ -0.44
COL4A3BP-204ENST00000405807 PCNX1Q96RV3 2341 aa12.28□□□□□ -0.44
COL4A3BP-204ENST00000405807 ZNF318Q5VUA4 2279 aa12.27□□□□□ -0.44
COL4A3BP-204ENST00000405807 Q8N6K4 173 aa12.27□□□□□ -0.44
COL4A3BP-204ENST00000405807 SLC25A16P16260 332 aa12.27□□□□□ -0.45
COL4A3BP-204ENST00000405807 ORMDL2Q53FV1 153 aa12.27□□□□□ -0.45
COL4A3BP-204ENST00000405807 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
COL4A3BP-204ENST00000405807 ZFAND3Q9H8U3 227 aa12.27□□□□□ -0.45
COL4A3BP-204ENST00000405807 A0A0U1RRA0 63 aa12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 C15orf32Q32M92 178 aa12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 SCGB1D4Q6XE38 83 aa12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 MRPL53Q96EL3 112 aaKnown RBP12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 SCGB3A1Q96QR1 104 aa12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 IGHV7-81A0A0B4J1V7 117 aa12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 LINC01620Q4KN68 170 aa12.26□□□□□ -0.45
COL4A3BP-204ENST00000405807 CFC1BP0CG36 223 aa12.25□□□□□ -0.45
COL4A3BP-204ENST00000405807 CFC1P0CG37 223 aa12.25□□□□□ -0.45
COL4A3BP-204ENST00000405807 BDP1A6H8Y1 2624 aa12.25□□□□□ -0.45
COL4A3BP-204ENST00000405807 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 A0A0U1RQV1 116 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 VMO1Q7Z5L0 202 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 TOMM6Q96B49 74 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 C9orf47Q6ZRZ4 202 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 FAM110DQ8TAY7 271 aaPredicted RBP12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 KLRB1Q12918 225 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
COL4A3BP-204ENST00000405807 CLPSL1A2RUU4 121 aa12.23□□□□□ -0.45
COL4A3BP-204ENST00000405807 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
COL4A3BP-204ENST00000405807 KLK15Q9H2R5 256 aa12.23□□□□□ -0.45
COL4A3BP-204ENST00000405807 TRBV10-2A0A0K0K1G8 114 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 MINOS1Q5TGZ0 78 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 MINOS1-NBL1R4GNA1 71 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 IGHV3OR16-13A0A075B7E8 117 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 IGHV3-74A0A0B4J1X5 117 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 SUMO2P61956 95 aaKnown RBP12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 Q8NA96 180 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
COL4A3BP-204ENST00000405807 POLEQ07864 2286 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 IGHV4-39P01824 125 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 ATXN8Q156A1 80 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 NSUN5P1Q3KNT7 163 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 Q8N9W7 124 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 LINC01600Q96MT4 127 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 METTL26Q96S19 204 aa12.21□□□□□ -0.45
COL4A3BP-204ENST00000405807 ZNF815PA8K554 130 aa12.21□□□□□ -0.46
COL4A3BP-204ENST00000405807 ECSCRQ19T08 205 aa12.21□□□□□ -0.46
COL4A3BP-204ENST00000405807 C2orf82Q6UX34 121 aa12.21□□□□□ -0.46
COL4A3BP-204ENST00000405807 PLEKHB2Q96CS7 222 aa12.21□□□□□ -0.46
COL4A3BP-204ENST00000405807 LY6HO94772 140 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 KLK9Q2XQG4 91 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 C6orf226Q5I0X4 101 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 KLK9Q9UKQ9 250 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 CDSNQ15517 529 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 CLEC19AQ6UXS0 136 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 WFDC11Q8NEX6 87 aa12.2□□□□□ -0.46
COL4A3BP-204ENST00000405807 TMEM170BQ5T4T1 132 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 TACC2O95359 2948 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 ARHGAP32A7KAX9 2087 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 LENEPQ9Y5L5 61 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 CACNA1HO95180 2353 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 OTOGLQ3ZCN5 2332 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 WNK2Q9Y3S1 2297 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 IGHV3-49A0A0A0MS15 119 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 H7C2G1 150 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 ATOX1O00244 68 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 ELANEP08246 267 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 C2orf66Q6UXQ4 117 aa12.19□□□□□ -0.46
COL4A3BP-204ENST00000405807 EEF1AKMT3Q96AZ1 226 aa12.18□□□□□ -0.46
COL4A3BP-204ENST00000405807 CCDC140Q96MF4 163 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms