RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 NEGR1Q7Z3B1 354 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 LINC01619G3V211 115 aa12.55□□□□□ -0.4
DNMT3A-205ENST00000402667 OR11H1Q8NG94 326 aa12.55□□□□□ -0.4
DNMT3A-205ENST00000402667 F5H697 171 aa12.55□□□□□ -0.4
DNMT3A-205ENST00000402667 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
DNMT3A-205ENST00000402667 DUX3Q96PT4 197 aa12.55□□□□□ -0.4
DNMT3A-205ENST00000402667 H7C1H1 209 aa12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 PLNP26678 52 aa12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 RPL32P62910 135 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 NEXN-AS1Q8NBZ9 246 aa12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 F8VRH5 84 aa12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 POLR2KP53803 58 aaKnown RBP12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 WFDC11Q8NEX6 87 aa12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 C4orf3Q8WVX3 66 aa12.54□□□□□ -0.4
DNMT3A-205ENST00000402667 KNCNA6PVL3 124 aa12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 SYT8Q8NBV8 401 aa12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 NBPF19A0A087WUL8 3843 aa12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 DEFB131AP59861 70 aa12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 KHDC1LQ5JSQ8 128 aa12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 RNASE8Q8TDE3 154 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
DNMT3A-205ENST00000402667 ITPR3Q14573 2671 aa12.52□□□□□ -0.4
DNMT3A-205ENST00000402667 BAALCQ8WXS3 180 aa12.52□□□□□ -0.41
DNMT3A-205ENST00000402667 CRYGDP07320 174 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 HLA-DRB4P13762 266 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 TMEM86BQ8N661 226 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 HIGD1BQ9P298 99 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 PEMTQ9UBM1 199 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 HLA-DRB4X5D2U9 266 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 VCYO14598 125 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 HIST2H2BDQ6DRA6 164 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 DLX4Q92988 240 aaPredicted RBP12.51□□□□□ -0.41
DNMT3A-205ENST00000402667 A6NDN8 102 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 RBMY1A1P0DJD3 496 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 RBMY1CP0DJD4 496 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 RBMY1FQ15415 496 aaKnown RBP12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 AMMECR1LQ6DCA0 310 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 DEFB104AQ8WTQ1 72 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 TRBV25-1A0A075B6N4 114 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 SDHAF1A6NFY7 115 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 HIST2H2BCQ6DN03 193 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 Q6ZSV7 163 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 KLHL30-AS1Q8NEE0 82 aa12.5□□□□□ -0.41
DNMT3A-205ENST00000402667 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 H3BMM0 161 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 CYSLTR1Q9Y271 337 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 CBY1Q9Y3M2 126 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 TRGV11A0A075B6L2 103 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 TRAV2A0A0B4J234 112 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 TRAV8-6A0A0B4J262 113 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 PRSS29PA6NIE9 313 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 K7EP13 123 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 M0QY20 66 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 ZNF56Q15929 161 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 ZNF876PQ49A33 203 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 CHAC1Q9BUX1 264 aa12.49□□□□□ -0.41
DNMT3A-205ENST00000402667 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 A8MTW9 85 aa12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 H3BRM9 83 aa12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 MORN3Q6PF18 240 aaPredicted RBP12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 TP53TG1Q9Y2A0 90 aa12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 RBMY1BA6NDE4 496 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 RBMY1EA6NEQ0 496 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 RBMY1DP0C7P1 496 aaKnown RBP12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 CCDC168Q8NDH2 2452 aa12.48□□□□□ -0.41
DNMT3A-205ENST00000402667 DNAJC9-AS1A6NH13 148 aa12.47□□□□□ -0.41
DNMT3A-205ENST00000402667 TEX29Q8N6K0 151 aa12.47□□□□□ -0.41
DNMT3A-205ENST00000402667 IGIPA6NJ69 53 aa12.46□□□□□ -0.41
DNMT3A-205ENST00000402667 TSHBP01222 138 aa12.46□□□□□ -0.41
DNMT3A-205ENST00000402667 DYNLRB2Q8TF09 96 aa12.46□□□□□ -0.41
DNMT3A-205ENST00000402667 DEFB114Q30KQ6 69 aa12.46□□□□□ -0.41
DNMT3A-205ENST00000402667 LINC01549A6NIU2 74 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 HTN1P15515 57 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 GCSHP23434 173 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 RPL39P62891 51 aaKnown RBP12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 ZNF256Q9Y2P7 627 aaPredicted RBP12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 AKAP9Q99996 3911 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 C9orf118A6NHY6 69 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 RIPPLY3P57055 190 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 RBX1P62877 108 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 MAP6D1Q9H9H5 199 aa12.45□□□□□ -0.42
DNMT3A-205ENST00000402667 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
DNMT3A-205ENST00000402667 FLNAP21333 2647 aaKnown RBP12.44□□□□□ -0.42
DNMT3A-205ENST00000402667 FXYD2P54710 66 aa12.44□□□□□ -0.42
DNMT3A-205ENST00000402667 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
DNMT3A-205ENST00000402667 ESM1Q9NQ30 184 aa12.44□□□□□ -0.42
DNMT3A-205ENST00000402667 TENM4Q6N022 2769 aa12.43□□□□□ -0.42
DNMT3A-205ENST00000402667 TMEM141Q96I45 108 aa12.43□□□□□ -0.42
DNMT3A-205ENST00000402667 OR11H12B2RN74 326 aa12.43□□□□□ -0.42
DNMT3A-205ENST00000402667 PRM2P04554 102 aa12.43□□□□□ -0.42
DNMT3A-205ENST00000402667 OR11H2Q8NH07 326 aa12.43□□□□□ -0.42
DNMT3A-205ENST00000402667 RAB37Q96AX2 223 aa12.43□□□□□ -0.42
DNMT3A-205ENST00000402667 C11orf44Q8N8P7 122 aa12.42□□□□□ -0.42
DNMT3A-205ENST00000402667 RAX2Q96IS3 184 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms