RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 IGKV1-9A0A0C4DH69 117 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 C1QCP02747 245 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 HRKO00198 91 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 SPATA12Q7Z6I5 190 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 CELA1Q9UNI1 258 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 IGHV4-61A0A0C4DH41 118 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 GYPEP15421 78 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 IGHV3-38A0A0C4DH36 116 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 TMEM223A0PJW6 202 aa6.81□□□□□ -1.32
CACNA1C-220ENST00000399655 H0YJW9 148 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 H3BUA1 57 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 TMEM200BQ69YZ2 307 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 C8orf87E5RJ46 101 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 FHL1Q13642 323 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 NOP10Q9NPE3 64 aaKnown RBP6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 TCRBV5S1A1TA0A578 114 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 E9PLD3 99 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 NCR3O14931 201 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 PRR25Q96S07 402 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 TMEM213A2RRL7 107 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 GLI3P10071 1580 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 FAM201AQ5SY85 155 aa6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 LOXL1Q08397 574 aaPredicted RBP6.8□□□□□ -1.32
CACNA1C-220ENST00000399655 J3QRE1 110 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 FAM110DQ8TAY7 271 aaPredicted RBP6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 DHRS4-AS1Q9P1J3 65 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 Q6ZQY7 126 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 TRBV10-3A0A0K0K1G6 114 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 IGKV1D-12P01611 117 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 OVOL3O00110 214 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 Q6ZQT7 251 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 C5orf38Q86SI9 138 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 LRP5O75197 1615 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 CTSGP08311 255 aa6.79□□□□□ -1.32
CACNA1C-220ENST00000399655 USP9XQ93008 2570 aaPredicted RBP6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 LINC01565O15544 149 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 LYPD3O95274 346 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 LOC101059948A0A1B0GTJ6 334 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 LY75O60449 1722 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 MIAQ16674 131 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 Q8N9W7 124 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 J3QLI3 93 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 TFF1P04155 84 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 SPRY4Q9C004 299 aa6.78□□□□□ -1.32
CACNA1C-220ENST00000399655 CFAP126Q5VTH2 177 aa6.77□□□□□ -1.32
CACNA1C-220ENST00000399655 IGLV3-9A0A075B6K5 115 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV1D-16P01601 117 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 IGHV1-69P01742 117 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 NDUFA4L2Q9NRX3 87 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 TRAV7A0A075B6U4 112 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 SMIM9A6NGZ8 99 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 SRRM5B3KS81 715 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 CD24P25063 80 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 LDLRAD1Q5T700 205 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 CCKP06307 115 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 FXYD5Q96DB9 178 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 E9PLN8 166 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 AGPAT4-IT1Q9H0P7 198 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 PAPPAQ13219 1627 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 TRBV6-6A0A0A6YYG2 114 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 WFDC2Q14508 124 aa6.77□□□□□ -1.33
CACNA1C-220ENST00000399655 PIN1P1O15428 100 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 WFDC1Q9HC57 220 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 C9orf66Q5T8R8 295 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 SPAARA0A1B0GVQ0 90 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV1D-13A0A0B4J2D9 117 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV2-29A2NJV5 120 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV1-13P0DP09 117 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 ZNF747Q9BV97 191 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 ODF3L1Q8IXM7 274 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 AMELYQ99218 206 aa6.76□□□□□ -1.33
CACNA1C-220ENST00000399655 PRORYQ9H606 182 aa6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 FOXS1O43638 330 aa6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 IL9P15248 144 aa6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 C5orf56Q8N8D9 126 aa6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 LINC01590Q5TEZ4 76 aa6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 BRWD3Q6RI45 1802 aa6.75□□□□□ -1.33
CACNA1C-220ENST00000399655 IGHV1-2P23083 117 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 NDUFA11Q86Y39 141 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 HHLA3Q9XRX5 114 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 F8W735 103 aaPredicted RBP6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 ZFAND3Q9H8U3 227 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 H7C423 109 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 IGLV10-54A0A075B6I4 117 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 SAA4P35542 130 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 Q6ZS49 121 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 HIGD2AQ9BW72 106 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 H3BRN7 92 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 EBI3Q14213 229 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 HRCT1Q6UXD1 115 aa6.74□□□□□ -1.33
CACNA1C-220ENST00000399655 IGKV1-6A0A0C4DH72 117 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms