RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 SPCS1Q9Y6A9 102 aa7.86□□□□□ -1.15
CPSF1P1-201ENST00000397477 DUSP14O95147 198 aaKnown RBP7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 KLHL30-AS1Q8NEE0 82 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 SDHAF1A6NFY7 115 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 GTF2H5Q6ZYL4 71 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 APRG1Q8IVJ8 170 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 NRACQ8N912 160 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 SYT8Q8NBV8 401 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 OR1N2Q8NGR9 330 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 H7C2G1 150 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 FABP2P12104 132 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 FXYD2P54710 66 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 DSCR9P59020 149 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 OR9G4Q8NGQ1 327 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 MRAP2Q96G30 205 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 UBE2E2Q96LR5 201 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 VPREB3Q9UKI3 123 aa7.85□□□□□ -1.15
CPSF1P1-201ENST00000397477 IGHV3-16A0A0C4DH30 117 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 SEC11AP67812 179 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 RNASE13Q5GAN3 156 aaKnown RBP7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 BOD1L2Q8IYS8 172 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 Q8N1Y9 231 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 OPRPNQ99935 248 aaPredicted RBP7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 ITPR3Q14573 2671 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 APOMO95445 188 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 SMAGPQ0VAQ4 97 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 LINC01587Q99440 93 aa7.84□□□□□ -1.15
CPSF1P1-201ENST00000397477 TRBV25-1A0A075B6N4 114 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 PRSS29PA6NIE9 313 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 ZNF815PA8K554 130 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 H7C1H1 209 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 RNASE3P12724 160 aaKnown RBP7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 ZNF575Q86XF7 245 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 ZFHX3Q15911 3703 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 NF1P21359 2839 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 H3BUA1 57 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 GATA3P23771 443 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 SAMD13Q5VXD3 122 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 SUMO4Q6EEV6 95 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 MAPKAPK5-AS1Q8N8E1 139 aa7.83□□□□□ -1.16
CPSF1P1-201ENST00000397477 LOC107984156A0A0G2JMH3 177 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 ARL17AQ8IVW1 177 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 CNFNQ9BYD5 112 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 A0A087WX48 190 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGLV1-40P01703 118 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 XCL2Q9UBD3 114 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 LENEPQ9Y5L5 61 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 FBN2P35556 2912 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 PSMB8P28062 276 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 SAMD5Q5TGI4 173 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 PHLDA1Q8WV24 401 aaPredicted RBP7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 GTSF1LQ9H1H1 148 aa7.82□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGHV1OR15-1A0A075B7D0 117 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGHV3-38A0A0C4DH36 116 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 F8VRH5 84 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGHV3-53P01767 116 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 P0DMU3 169 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 FAM231AP0DMU4 169 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 FAM231CP0DMU5 169 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 HELZ2Q9BYK8 2649 aaKnown RBP7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 SRSF2Q01130 221 aaKnown RBP7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 PRADC1Q9BSG0 188 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 LGALS1P09382 135 aaKnown RBP7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 FGF6P10767 208 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 AMTNQ6UX39 209 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 DCANP1Q8TF63 244 aa7.81□□□□□ -1.16
CPSF1P1-201ENST00000397477 SOCS3O14543 225 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 VCYO14598 125 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGHV4-31P0DP07 118 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 PLNP26678 52 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 HERVK_113P61574 105 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 YAE1D1Q9NRH1 226 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 A0A0J9YX75 114 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 MXRA5Q9NR99 2828 aa7.8□□□□□ -1.16
CPSF1P1-201ENST00000397477 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 PROK1P58294 105 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 DEFB113Q30KQ7 82 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 C19orf54Q5BKX5 351 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 TMEM61Q8N0U2 210 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 HHLA3Q9XRX5 114 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 TNFRSF18Q9Y5U5 241 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 PRSS2P07478 247 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 SCGB1C2P0DMR2 95 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 DGAT2L7PQ6IED9 249 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 ZNF843Q8N446 348 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 BAALCQ8WXS3 180 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 RAX2Q96IS3 184 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 PPP1R17O96001 155 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 HLA-DRB4P13762 266 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 HLA-DRB4X5D2U9 266 aa7.79□□□□□ -1.16
CPSF1P1-201ENST00000397477 ADARB2-AS1A8MUL3 147 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 C20orf78Q9BR46 151 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 IGLV2-18A0A075B6J9 118 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 H3BRM9 83 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 CEMP1Q6PRD7 247 aaPredicted RBP7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 ZFP2Q6ZN57 461 aa7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 MRPL16Q9NX20 251 aaKnown RBP7.78□□□□□ -1.16
CPSF1P1-201ENST00000397477 K7EMT4 169 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms